ArticlePhilosophical transactions of the Royal Society of London. Series B, Biological sciences2021
Benchmarking Oxford Nanopore read assemblers for high-quality molluscan genomes.
Article in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.
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Who cites it
24 citing papers in PubMed.
- LORA: a polymorphic multi-sample long read assembly pipeline.NAR genomics and bioinformatics · 2026Article
- Chromosome-level genome assembly of the sponge Halisarca dujardinii.Scientific data · 2026Article
- Reliable Inference of Phylogenomic Relationship via Assembly-Based Strategy Accommodating Raw Reads and Proteins.Molecular ecology resources · 2026Article
- Unlocking the full potential of nanopore sequencing: tips, tricks, and advanced data analysis techniques.Nucleic acids research · 2026Review
- A Strategy for Single-Run Sequencing of the Water Buffalo Genome: (II) Fast One-Step Assembly of Highly Continuous Chromosome Sequences.Animals : an open access journal from MDPI · 2025Article
- Annotated genome of the Atlantic dog whelk, Nucella lapillus.G3 (Bethesda, Md.) · 2025Article
- Nuclear and organelle genome assemblies of 5 Cucumis melo L. accessions, Ananas, Canton, PI 414723, Vedrantais, and Zhimali, belonging to diverse botanical groups.G3 (Bethesda, Md.) · 2025Article
- Enhancing public health surveillance: a comparative study of platform-specific and hybrid assembly approaches in SARS-CoV-2 genome sequencing.Microbial genomics · 2025Article
- Four chromosome-scale ampullariid genomes: high-quality resources for ecological, evolutionary, and invasion biology studies.DNA research : an international journal for rapid publication of reports on genes and genomes · 2025Article
- Chromosome-scale assembly of Artemia tibetiana genome, first aquatic invertebrate genome from Tibet Plateau.Scientific data · 2025Article
- Genome of Kumamoto OysterEvolutionary applications · 2025Article
- Comparative genomics provides insights into the biogeographic and biochemical diversity of meliaceous species.Nature communications · 2025Article
- A chromosomal-level genome assembly of Begonia fimbristipula (Begoniaceae).Scientific data · 2025Article
- Article
- Phylogenomic analyses shed light on the relationships of chiton superfamilies and shell-eye evolution.Marine life science & technology · 2023Article
- Mabs, a suite of tools for gene-informed genome assembly.BMC bioinformatics · 2023Article
- Reference-free lossless compression of nanopore sequencing reads using an approximate assembly approach.Scientific reports · 2023Article
- Chromosome-level reference genome for European flat oyster (Evolutionary applications · 2022Article
- Establishing MinION Sequencing and Genome Assembly Procedures for the Analysis of the Rooibos (Plants (Basel, Switzerland) · 2022Article
- Duplication of spiralian-specific TALE genes and evolution of the blastomere specification mechanism in the bivalve lineage.EvoDevo · 2021Article
Corrections and comments
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Choosing the optimum assembly approach is essential to achieving a high-quality genome assembly suitable for comparative and evolutionary genomic investigations. Significant recent progress in long-read sequencing technologies such as PacBio and Oxford Nanopore Technologies (ONT) has also brought about a large variety of assemblers. Although these have been extensively tested on model species such as
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