Evidence map›Paper›PMID 33812847›Full record

ArticleBiophysical journal2021

Paradoxical relationships between active transport and global protein distributions in neurons.

Adriano Bellotti, Jonathan Murphy, Lin Lin, Ronald Petralia, Ya-Xian Wang, Dax Hoffman, Timothy O'Leary

Open access · hybridAbstract read
In one paragraph

Article in Biophysical journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 4 countries.

Adriano BellottiNational Institute of Child Health and Human Development, Bethesda, Maryland; Department of Engineering, University of Cambridge, Cambridge, United Kingdom.
Jonathan MurphyNational Institute of Child Health and Human Development, Bethesda, Maryland.
Lin LinNational Institute of Child Health and Human Development, Bethesda, Maryland.
Ronald PetraliaNational Institute on Deafness and Other Communication Disorders, Bethesda, Maryland.
Ya-Xian WangNational Institute on Deafness and Other Communication Disorders, Bethesda, Maryland.
Dax HoffmanNational Institute of Child Health and Human Development, Bethesda, Maryland. Electronic address: hoffmand@mail.nih.gov.
Timothy O'LearyDepartment of Engineering, University of Cambridge, Cambridge, United Kingdom. Electronic address: timothy.oleary@eng.cam.ac.uk.
Eunice Kennedy Shriver National Institute of Child Health and Human Development · USNational Institute on Deafness and Other Communication Disorders · USUniversity of Cambridge · GBNational Institute of Child Health · HU

Funding

Potassium Channels and Dendritic Function in Hippocampal Pyramidal NeuronsZIAHD008755 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI HOFFMAN, DAX A · 2009 to 2025
$29.6M
Advanced Imaging CoreZICDC000081 · NIDCD · NATIONAL INSTITUTE ON DEAFNESS AND OTHER COMMUNICATION DISORDERS · PI WINKLER, DENNIS · 2012 to 2025
$17.4M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008719 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DARVILLE, TONI, DESHMUKH, MOHANISH P · 1999 to 2023
$15.1M
SYNTACTIC REPRESENTATIONSP50DC000081 · NIDCD · BOSTON UNIVERSITY MEDICAL CAMPUS · PI NAESER, MARGARET A · 1992 to 2001
$989k
Intramural NIH HHS ZIC DC000081NIDCD NIH HHS P50 DC000081NIGMS NIH HHS T32 GM008719
6 · The paper itself

Abstract

Neural function depends on continual synthesis and targeted trafficking of intracellular components, including ion channel proteins. Many kinds of ion channels are trafficked over long distances to specific cellular compartments. This raises the question of whether cargo is directed with high specificity during transit or whether cargo is distributed widely and sequestered at specific sites. We addressed this question by experimentally measuring transport and expression densities of Kv4.2, a voltage-gated transient potassium channel that exhibits a specific dendritic expression that increases with distance from the soma and little or no functional expression in axons. In over 500 h of quantitative live imaging, we found substantially higher densities of actively transported Kv4.2 subunits in axons as opposed to dendrites. This paradoxical relationship between functional expression and traffic density supports a model-commonly known as the sushi belt model-in which trafficking specificity is relatively low and active sequestration occurs in compartments where cargo is expressed. In further support of this model, we find that kinetics of active transport differs qualitatively between axons and dendrites, with axons exhibiting strong superdiffusivity, whereas dendritic transport resembles a weakly directed random walk, promoting mixing and opportunity for sequestration. Finally, we use our data to constrain a compartmental reaction-diffusion model that can recapitulate the known Kv4.2 density profile. Together, our results show how nontrivial expression patterns can be maintained over long distances with a relatively simple trafficking mechanism and how the hallmarks of a global trafficking mechanism can be revealed in the kinetics and density of cargo.

Indexed as

DendritesShal Potassium ChannelsAxonsBiological Transport, ActiveNeuronsProtein TransportShal Potassium Channels

Identifiers

PMID33812847
PMCPMC8390833
OpenAlexW3141724349

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.