Evidence map›Paper›PMID 33812022›Full record

ArticleMetabolic engineering2021

Microbial production of human milk oligosaccharide lactodifucotetraose.

Angela Zhang, Lei Sun, Yuanyuan Bai, Hai Yu, John B McArthur, Xi Chen, Shota Atsumi

Abstract read
In one paragraph

Article in Metabolic engineering, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Microbial Production of Human Milk Oligosaccharides.Molecules (Basel, Switzerland) · 2023
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Angela ZhangDepartment of Chemistry, University of California, Davis, One Shields Ave, Davis, CA, 95616, USA.
Lei SunDepartment of Chemistry, University of California, Davis, One Shields Ave, Davis, CA, 95616, USA; School of Biotechnology, Jiangnan University, Wuxi, 214122, PR China.
Yuanyuan BaiDepartment of Chemistry, University of California, Davis, One Shields Ave, Davis, CA, 95616, USA.
Hai YuDepartment of Chemistry, University of California, Davis, One Shields Ave, Davis, CA, 95616, USA.
John B McArthurDepartment of Chemistry, University of California, Davis, One Shields Ave, Davis, CA, 95616, USA.
Xi ChenDepartment of Chemistry, University of California, Davis, One Shields Ave, Davis, CA, 95616, USA.
Shota AtsumiDepartment of Chemistry, University of California, Davis, One Shields Ave, Davis, CA, 95616, USA. Electronic address: satsumi@ucdavis.edu.
University of California, Davis · USJiangnan University · CN

Funding

UC Davis Training Program in Chemical BiologyT32GM113770 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BEAL, PETER A. · 2015 to 2019
$742k
NIGMS NIH HHS T32 GM113770
6 · The paper itself

Abstract

Human milk oligosaccharides (HMOs) are potent bioactive compounds that modulate neonatal health and are of interest for development as potential drug treatments for adult diseases. The potential of these molecules, their limited access from natural sources, and difficulty in large-scale isolation of individual HMOs for studies and applications have motivated the development of chemical syntheses and in vitro enzymatic catalysis strategies. Whole cell biocatalysts are emerging as alternative self-regulating production platforms that have the potential to reduce the cost for enzymatic synthesis of HMOs. Whole cell biocatalysts for the production of short-chained, linear and small monofucosylated HMOs have been reported but those for fucosylated structures with higher complexity have not been explored. In this study, we established a strategy for producing a difucosylated HMO, lactodifucotetraose (LDFT), from lactose and L-fucose in Escherichia coli. We used two bacterial fucosyltransferases with narrow acceptor selectivity to drive the sequential fucosylation of lactose and intermediate 2'-fucosyllactose (2'-FL) to produce LDFT. Deletion of substrate degradation pathways that decoupled cellular growth from LDFT production, enhanced expression of native substrate transporters and modular induction of the genes in the LDFT biosynthetic pathway allowed complete conversion of lactose into LDFT and minor quantities of the side product 3-fucosyllactose (3-FL). Overall, 5.1 g/L of LDFT was produced from 3 g/L lactose and 3 g/L L-fucose in 24 h. Our results demonstrate promising applications of engineered microbial biosystems for the production of multi-fucosylated HMOs for biochemical studies.

Indexed as

Milk, HumanOligosaccharidesFucoseFucosyltransferasesHumansFucoseFucosyltransferaseslactodifucotetraoseOligosaccharidesCarbohydratesFucosylationHuman milk oligosaccharidesLactodifucotetraoseMetabolic engineeringWhole cell biocatalysts

Identifiers

PMID33812022
PMCPMC13110423
OpenAlexW3141051008

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.