Evidence map›Paper›PMID 33811937›Full record

ArticleBiochimica et biophysica acta. Molecular cell research2021

The C2 domain of calpain 5 contributes to enzyme activation and membrane localization.

Vimala Bondada, Jozsef Gal, Charles Mashburn, David W Rodgers, Katherine E Larochelle, Dorothy E Croall, James W Geddes

Open access · greenAbstract read
In one paragraph

Article in Biochimica et biophysica acta. Molecular cell research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Genomic Loci Influencing Cue-Reactivity in Heterogeneous Stock Rats.bioRxiv : the preprint server for biology · 2024
    Article
  7. Article
  8. Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Vimala BondadaSpinal Cord and Brain Injury Research Center, College of Medicine, University of Kentucky, Lexington, KY, USA.
Jozsef GalSpinal Cord and Brain Injury Research Center, College of Medicine, University of Kentucky, Lexington, KY, USA; Department of Neuroscience, College of Medicine, University of Kentucky, Lexington, KY, USA.
Charles MashburnSpinal Cord and Brain Injury Research Center, College of Medicine, University of Kentucky, Lexington, KY, USA.
David W RodgersDepartment of Molecular and Cellular Biochemistry, Center for Structural Biology, College of Medicine, University of Kentucky, Lexington, KY, USA.
Katherine E LarochelleDepartment of Molecular & Biomedical Sciences, University of Maine, Orono, ME, USA.
Dorothy E CroallDepartment of Molecular & Biomedical Sciences, University of Maine, Orono, ME, USA.
James W GeddesSpinal Cord and Brain Injury Research Center, College of Medicine, University of Kentucky, Lexington, KY, USA; Department of Neuroscience, College of Medicine, University of Kentucky, Lexington, KY, USA. Electronic address: jgeddes@uky.edu.
University of Kentucky · USUniversity of Maine · US

Funding

The Maine Biomedical Research Network (INBRE)P20GM103423 · NIGMS · MOUNT DESERT ISLAND BIOLOGICAL LAB · PI Dustin Lynn Updike · 2012 to 2026
$60.0M
CNS Functions of Calpain 5R01NS095229 · NINDS · UNIVERSITY OF KENTUCKY · PI GEDDES, JAMES W. · 2016 to 2020
$1.9M
NIGMS NIH HHS P20 GM103423NINDS NIH HHS R01 NS095229
6 · The paper itself

Abstract

The enzymatic characteristics of the ubiquitous calpain 5 (CAPN5) remain undescribed despite its high expression in the central nervous system and links to eye development and disease. CAPN5 contains the typical protease core domains but lacks the C terminal penta-EF hand domain of classical calpains, and instead contains a putative C2 domain. This study used the SH-SY5Y neuroblastoma cell line stably transfected with CAPN5-3xFLAG variants to assess the potential roles of the CAPN5 C2 domain in Ca

Indexed as

Amino Acid SequenceC2 DomainsCalpainCell MovementEnzyme ActivationHumansModels, MolecularMutationProtein ConformationProtein DomainsCalpainCapn5 protein, humanCalciumCalpainCell cultureImmunofluorescenceMembranePlasma membraneProteaseProtein-lipid interaction

Identifiers

PMID33811937
PMCPMC8588747
OpenAlexW3151772518

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.