Evidence map›Paper›PMID 33810819›Full record

ArticleProteome science2021

Label-free quantitative proteomics of Sorghum bicolor reveals the proteins strengthening plant defense against insect pest Chilo partellus.

Vaijayanti A Tamhane, Surhud S Sant, Abhilash R Jadhav, Abdul R War, Hari C Sharma, Abdul Jaleel, Akanksha S Kashikar

Open access · goldAbstract read
In one paragraph

Article in Proteome science, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 35 citations in OpenAlex.

  1. A Pilot Proteomics Analysis ofInternational journal of molecular sciences · 2026
    Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Molecular mechanisms, genetic mapping, and genome editing for insect pest resistance in field crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 2 countries.

Vaijayanti A TamhaneInstitute of Bioinformatics and Biotechnology (IBB), Savitribai Phule Pune University (SPPU), Ganeshkhind Road, Pune, Maharashtra, 411 007, India. vatamhane@unipune.ac.in.ORCID http://orcid.org/0000-0001-5218-5359
Surhud S Sant *Institute of Bioinformatics and Biotechnology (IBB), Savitribai Phule Pune University (SPPU), Ganeshkhind Road, Pune, Maharashtra, 411 007, India.
Abhilash R Jadhav *Institute of Bioinformatics and Biotechnology (IBB), Savitribai Phule Pune University (SPPU), Ganeshkhind Road, Pune, Maharashtra, 411 007, India.
Abdul R WarInternational Crop Research Institute for the Semi-Arid -Tropics (ICRISAT), Patancheru, Telangana, 502324, India.
Hari C SharmaInternational Crop Research Institute for the Semi-Arid -Tropics (ICRISAT), Patancheru, Telangana, 502324, India.
Abdul JaleelRajiv Gandhi Centre for Biotechnology, Thiruvananthapuram, Kerala, 695014, India.
Akanksha S KashikarDepartment of Statistics, SPPU, Ganeshkhind Road, Pune, Maharashtra, 411 007, India.
Institute of Bioinformatics · INDr. Yashwant Singh Parmar University of Horticulture and Forestry · INIndian Institute of Science Education and Research Pune · INRajiv Gandhi Centre for Biotechnology · INSavitribai Phule Pune University · INWorld Vegetable Center · TW

Funding

Department of Science and Technology, Government of India SB/YS/LS-132/2013
6 · The paper itself

Abstract

backgroundSpotted stem borer- Chilo partellus - a Lepidopteran insect pest of Sorghum bicolor is responsible for major economic losses. It is an oligophagous pest, which bores through the plant stem, causing 'deadheart' and hampering the development of the main cob. We applied a label-free quantitative proteomics approach on three genotypes of S. bicolor with differential resistance/ susceptibility to insect pests, intending to identify the S. bicolor's systemic protein complement contributing to C. partellus tolerance.

methodsThe proteomes of S. bicolor with variable resistance to insect pests, ICSV700, IS2205 (resistant) and Swarna (susceptible) were investigated and compared using label-free quantitative proteomics to identify putative leaf proteins contributing to resistance to C. partellus.

resultsThe multivariate analysis on a total of 967 proteins led to the identification of proteins correlating with insect resistance/susceptibility of S. bicolor. Upon C. partellus infestation S. bicolor responded by suppression of protein and amino acid biosynthesis, and induction of proteins involved in maintaining photosynthesis and responding to stresses. The gene ontology analysis revealed that C. partellus-responsive proteins in resistant S. bicolor genotypes were mainly involved in stress and defense, small molecule biosynthesis, amino acid metabolism, catalytic and translation regulation activities. At steady-state, the resistant S. bicolor genotypes displayed at least two-fold higher numbers of unique proteins than the susceptible genotype Swarna, mostly involved in catalytic activities. Gene expression analysis of selected candidates was performed on S. bicolor by artificial induction to mimic C. partellus infestation.

conclusionThe collection of identified proteins differentially expressed in resistant S. bicolor, are interesting candidates for further elucidation of their role in defense against insect pests.

Indexed as

Chilo partellusInsect pestsin-solution proteomicsLabel-free quantitative proteomicsPlant defense

Identifiers

PMID33810819
PMCPMC8019186
OpenAlexW3149117790

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.