Evidence map›Paper›PMID 33810132›Full record

ArticleInternational journal of molecular sciences2021

Base-Pair Opening Dynamics Study of Fluoride Riboswitch in the

Juhyun Lee, Si-Eun Sung, Janghyun Lee, Jin Young Kang, Joon-Hwa Lee, Byong-Seok Choi

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Biophysical Study of the Structure, Dynamics, and Function of Nucleic Acids.International journal of molecular sciences · 2022
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Juhyun LeeDepartment of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Korea.
Si-Eun SungDepartment of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Korea.
Janghyun LeeDepartment of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Korea.
Jin Young KangDepartment of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Korea.ORCID 0000-0002-8493-7890
Joon-Hwa LeeDepartment of Chemistry and RINS, Gyeongsang National University, Gyeongnam 52828, Korea.ORCID 0000-0003-3137-4585
Byong-Seok ChoiDepartment of Chemistry, Korea Advanced Institute of Science and Technology (KAIST), 291 Daehak-ro, Yuseong-gu, Daejeon 34141, Korea.
Korea Advanced Institute of Science and Technology · KR

Funding

National Research Foundation of Korea 2020R1A2C1006909National Research Foundation of Korea 2020R1I1A1A0106840911Samsung Science and Technology Foundation SSTF-BA1701-10
6 · The paper itself

Abstract

Riboswitches are segments of noncoding RNA that bind with metabolites, resulting in a change in gene expression. To understand the molecular mechanism of gene regulation in a fluoride riboswitch, a base-pair opening dynamics study was performed with and without ligands using the

Indexed as

Base PairingGenes, BacterialRiboswitchAptamers, NucleotideBacillus cereusBase SequenceCatalysisFluoridesHydrogen BondingMagnetic Resonance SpectroscopyModels, MolecularNucleic Acid ConformationNucleotide MotifsAptamers, NucleotideFluoridesRiboswitchaptamerbase-pair openingfluoride riboswitchhydrogen exchange dynamicslong-range interactionNMRtertiary interaction

Identifiers

PMID33810132
PMCPMC8004769
OpenAlexW3137402039

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.