Evidence map›Paper›PMID 33807184›Full record

ArticlePlants (Basel, Switzerland)2021

Integrative Analysis of Gene Expression and miRNAs Reveal Biological Pathways Associated with Bud Paradormancy and Endodormancy in Grapevine.

Shuchi Smita, Michael Robben, Anup Deuja, Monica Accerbi, Pamela J Green, Senthil Subramanian, Anne Fennell

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Plants (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.3field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Molecular Mechanisms of Seasonal Gene Expression in Trees.International journal of molecular sciences · 2024
    Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Shuchi SmitaEdgar McFadden BioStress Laboratory, Agronomy, Horticulture, and Plant Science Department, BioSNTR, South Dakota State University, Brookings, SD 57007, USA.
Michael RobbenEdgar McFadden BioStress Laboratory, Agronomy, Horticulture, and Plant Science Department, BioSNTR, South Dakota State University, Brookings, SD 57007, USA.
Anup DeujaEdgar McFadden BioStress Laboratory, Agronomy, Horticulture, and Plant Science Department, BioSNTR, South Dakota State University, Brookings, SD 57007, USA.
Monica AccerbiDepartment of Plant and Soil Sciences and Delaware Biotechnology Institute, University of Delaware, Newark, DE 19713, USA.
Pamela J GreenDepartment of Plant and Soil Sciences and Delaware Biotechnology Institute, University of Delaware, Newark, DE 19713, USA.
Senthil SubramanianEdgar McFadden BioStress Laboratory, Agronomy, Horticulture, and Plant Science Department, BioSNTR, South Dakota State University, Brookings, SD 57007, USA.ORCID 0000-0002-7403-1139
Anne FennellEdgar McFadden BioStress Laboratory, Agronomy, Horticulture, and Plant Science Department, BioSNTR, South Dakota State University, Brookings, SD 57007, USA.ORCID 0000-0002-4234-6419
South Dakota State University · USBiotechnology Institute · US

Funding

National Science Foundation 0604755USDA SD00H633
6 · The paper itself

Abstract

Transition of grapevine buds from paradormancy to endodormancy is coordinated by changes in gene expression, phytohormones, transcription factors, and other molecular regulators, but the mechanisms involved in transcriptional and post-transcriptional regulation of dormancy stages are not well delineated. To identify potential regulatory targets, an integrative analysis of differential gene expression profiles and their inverse relationships with miRNA abundance was performed in paradormant (long day (LD) 15 h) or endodormant (short day (SD), 13 h)

Indexed as

dormancygrapevinemiRNAphotoperiodregulatory network

Identifiers

PMID33807184
PMCPMC8067045
OpenAlexW3145321009

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.