Evidence map›Paper›PMID 33806147›Full record

ArticleGenes2021

Single-Cell Sequencing Confirms Transcripts and V

Zhenling Deng, Huige Yan, Zhan Shi, Xinyu Tian, Zhuan Cui, Yingchun Sun, Song Wang, Danxia Zheng, Xiaoyan Qiu, Yue Wang

Open access · goldAbstract read
In one paragraph

Article in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.1field-weighted citation impact, top 54% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Zhenling DengDepartment of Nephrology, Peking University Third Hospital, Beijing 100191, China.
Huige YanDepartment of Immunology, School of Basic Medical Sciences, Peking University, Beijing 100191, China.
Zhan ShiDepartment of Immunology, School of Basic Medical Sciences, Peking University, Beijing 100191, China.
Xinyu TianDepartment of Nephrology, Peking University Third Hospital, Beijing 100191, China.
Zhuan CuiDepartment of Nephrology, Peking University Third Hospital, Beijing 100191, China.
Yingchun SunDepartment of Nephrology, Peking University Third Hospital, Beijing 100191, China.
Song WangDepartment of Nephrology, Peking University Third Hospital, Beijing 100191, China.
Danxia ZhengDepartment of Nephrology, Peking University Third Hospital, Beijing 100191, China.
Xiaoyan QiuDepartment of Immunology, School of Basic Medical Sciences, Peking University, Beijing 100191, China.
Yue WangDepartment of Nephrology, Peking University Third Hospital, Beijing 100191, China.
Peking University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Most glomerular diseases are associated with inflammation caused by deposited pathogenic immunoglobulins (Igs), which are believed to be produced by B cells. However, our previous study indicated that the human podocyte cell line can produce IgG. In this study, we aimed to confirm the transcripts and characterize the repertoires of Igs in primary podocytes at single cell level. First, single-cell RNA sequencing of cell suspensions from "normal" kidney cortexes by a 10xGenomics Chromium system detected Ig transcripts in 7/360 podocytes and Ig gene segments in 106/360 podocytes. Then, we combined nested PCR with Sanger sequencing to detect the transcripts and characterize the repertoires of Igs in 48 single podocytes and found that five classes of Ig heavy chains were amplified in podocytes. Four-hundred and twenty-nine V

Indexed as

Gene RearrangementBase SequenceCase-Control StudiesHumansImmunoglobulin delta-ChainsImmunoglobulin J-ChainsImmunoglobulin Variable RegionKidney DiseasesPodocytesSequence Homology, Nucleic AcidSingle-Cell AnalysisImmunoglobulin delta-ChainsImmunoglobulin J-ChainsImmunoglobulin Variable Regiongene transcriptionimmunoglobulinspodocytesingle-cell RNA sequencingVHDJH rearrangement

Identifiers

PMID33806147
PMCPMC8064494
OpenAlexW3138062098

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.