Evidence map›Paper›PMID 33804854›Full record

ArticleInternational journal of molecular sciences2021

The Long Linker Region of Telomere-Binding Protein TRF2 Is Responsible for Interactions with Lamins.

Aleksandra O Travina, Nadya V Ilicheva, Alexey G Mittenberg, Sergey V Shabelnikov, Anastasia V Kotova, Olga I Podgornaya

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Aleksandra O TravinaInstitute of Cytology RAS, 194064 St. Petersburg, Russia.
Nadya V IlichevaInstitute of Cytology RAS, 194064 St. Petersburg, Russia.ORCID 0000-0001-9594-7202
Alexey G MittenbergInstitute of Cytology RAS, 194064 St. Petersburg, Russia.ORCID 0000-0002-3675-0597
Sergey V ShabelnikovInstitute of Cytology RAS, 194064 St. Petersburg, Russia.
Anastasia V KotovaInstitute of Cytology RAS, 194064 St. Petersburg, Russia.
Olga I PodgornayaInstitute of Cytology RAS, 194064 St. Petersburg, Russia.
Institute of Cytology · RUSt Petersburg University · RU

Funding

Russian Foundation for Basic Research 19-34-80032Russian Foundation for Basic Research 20-34-90067Russian Science Support Foundation 19-74-20102
6 · The paper itself

Abstract

Telomere-binding factor 2 (TRF2) is part of the shelterin protein complex found at chromosome ends. Lamin A/C interacts with TRF2 and influences telomere position. TRF2 has an intrinsically disordered region between the ordered dimerization and DNA-binding domains. This domain is referred to as the long linker region of TRF2, or udTRF2. We suggest that udTRF2 might be involved in the interaction between TRF2 and lamins. The recombinant protein corresponding to the udTRF2 region along with polyclonal antibodies against this region were used in co-immunoprecipitation with purified lamina and nuclear extracts. Co-immunoprecipitation followed by Western blots and mass spectrometry indicated that udTRF2 interacts with lamins, preferably lamins A/C. The interaction did not involve any lamin-associated proteins, was not dependent on the post-translation modification of lamins, nor did it require their higher-order assembly. Besides lamins, a number of other udTRF2-interacting proteins were identified by mass spectrometry, including several heterogeneous nuclear ribonucleoproteins (hnRNP A2/B1, hnRNPA1, hnRNP A3, hnRNP K, hnRNP L, hnRNP M), splicing factors (SFPQ, NONO, SRSF1, and others), helicases (DDX5, DHX9, and Eif4a3l1), topoisomerase I, and heat shock protein 71, amongst others. Some of the identified interactors are known to be involved in telomere biology; the roles of the others remain to be investigated. Thus, the long linker region of TRF2 (udTRF2) is a regulatory domain responsible for the association between TRF2 and lamins and is involved in interactions with other proteins.

Indexed as

Binding SitesCells, CulturedHumansLaminsProtein BindingTelomeric Repeat Binding Protein 2LaminsTelomeric Repeat Binding Protein 2TERF2 protein, humanchromosome organizationlaminsnuclear laminatelomereTRF2

Identifiers

PMID33804854
PMCPMC8036907
OpenAlexW3135953460

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.