Evidence map›Paper›PMID 33803184›Full record

ReviewGenes2021

Molecular and Metabolic Subtypes in Sporadic and Inherited Clear Cell Renal Cell Carcinoma.

Maria F Czyzyk-Krzeska, Julio A Landero Figueroa, Shuchi Gulati, John T Cunningham, Jarek Meller, Behrouz ShamsaeI, Bhargav Vemuri, David R Plas

Abstract readReview
In one paragraph

Review in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
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  15. Review
  16. Loss of Von Hippel-Lindau (International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Maria F Czyzyk-KrzeskaDepartment of Cancer Biology, University of Cincinnati, Cincinnati, OH 45267, USA.
Julio A Landero FigueroaDepartment of Pharmacology and System Biology, College of Medicine, University of Cincinnati, Cincinnati, OH 45267, USA.
Shuchi GulatiDivision of Hematology and Oncology, Department of Medicine, University of Cincinnati, Cincinnati, OH 45267, USA.ORCID 0000-0001-6793-9694
John T CunninghamDepartment of Cancer Biology, University of Cincinnati, Cincinnati, OH 45267, USA.ORCID 0000-0001-6490-4533
Jarek MellerDepartment of Pharmacology and System Biology, College of Medicine, University of Cincinnati, Cincinnati, OH 45267, USA.
Behrouz ShamsaeIDivision of Biostatistics and Bioinformatics, Department of Environmental and Public Health Sciences, University of Cincinnati, Cincinnati, OH 45267, USA.
Bhargav VemuriDepartment of Cancer Biology, University of Cincinnati, Cincinnati, OH 45267, USA.
David R PlasDepartment of Cancer Biology, University of Cincinnati, Cincinnati, OH 45267, USA.ORCID 0000-0001-7568-1400

Funding

REPRODUCTIVE AND DEVELOPMENTAL TOXICOLOGY RESEARCHP30ES006096 · NIEHS · UNIVERSITY OF CINCINNATI · PI PINNEY, SUSAN MENGEL · 1992 to 2022
$35.4M
The Molecular Determinants of Virus Induced Biliary AtresiaR01DK091566 · NIDDK · STANFORD UNIVERSITY · PI GREGORY M TIAO · 2011 to 2026
$4.9M
Role of ubiquitylation in renal cancerR01CA122346 · NCI · UNIVERSITY OF CINCINNATI · PI CZYZYK-KRZESKA, MARIA F · 2007 to 2017
$3.0M
Defining the biological roles of PRPS isozymes in normal and diseased settingsR35GM133561 · NIGMS · UNIVERSITY OF CINCINNATI · PI CUNNINGHAM, TOM · 2019 to 2023
$2.1M
Metabolic Adaptive Responses in CancerR01CA168815 · NCI · UNIVERSITY OF CINCINNATI · PI PLAS, DAVID R · 2013 to 2017
$2.1M
Post-Graduate Hematology/Oncology Translational (PG-HOT) Training ProgramT32CA236764 · NCI · UNIVERSITY OF CINCINNATI · PI QI, XIAOYANG, SCAGLIONI, PIER PAOLO · 2019 to 2023
$2.1M
Cell-specific analysis of sub-kinomes in schizophreniaR01MH107487 · NIMH · UNIVERSITY OF TOLEDO HEALTH SCI CAMPUS · PI MCCULLUMSMITH, ROBERT E, MELLER, JAREK · 2016 to 2020
$1.9M
Investigating Mechanisms of Deregulated Nucleotide Metabolism in CancerR01CA230904 · NCI · UNIVERSITY OF CINCINNATI · PI CUNNINGHAM, TOM · 2019 to 2023
$1.8M
Mechanisms of selective autophagyR01GM128216 · NIGMS · UNIVERSITY OF CINCINNATI · PI CZYZYK-KRZESKA, MARIA F · 2019 to 2022
$1.4M
Tumor Suppressing Pathways in Renal CancerI01BX001110 · VA · CINCINNATI VA MEDICAL CENTER RESEARCH · PI CZYZYK-KRZESKA, MARIA F · 2011 to 2024
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BLRD VA I01 BX001110NCI NIH HHS R01 CA122346NCI NIH HHS R01 CA168815NCI NIH HHS R01 CA230904NCI NIH HHS T32 CA236764NIDDK NIH HHS R01 DK091566NIEHS NIH HHS P30 ES006096NIGMS NIH HHS R01 GM128216NIGMS NIH HHS R35 GM133561NIH HHS R01GM128216NIMH NIH HHS R01 MH107487
6 · The paper itself

Abstract

The promise of personalized medicine is a therapeutic advance where tumor signatures obtained from different omics platforms, such as genomics, transcriptomics, proteomics, and metabolomics, in addition to environmental factors including metals and metalloids, are used to guide the treatments. Clear cell renal carcinoma (ccRCC), the most common type of kidney cancer, can be sporadic (frequently) or genetic (rare), both characterized by loss of the von Hippel-Lindau (VHL) gene that controls hypoxia inducible factors. Recently, several genomic subtypes were identified with different prognoses. Transcriptomics, proteomics, metabolomics and metallomic data converge on altered metabolism as the principal feature of the disease. However, in view of multiple biochemical alterations and high level of tumor heterogeneity, identification of clearly defined subtypes is necessary for further improvement of treatments. In the future, single-cell combined multi-omics approaches will be the next generation of analyses gaining deeper insights into ccRCC progression and allowing for design of specific signatures, with better prognostic/predictive clinical applications.

Indexed as

AnimalsCarcinoma, Renal CellGene Expression ProfilingGene Expression Regulation, NeoplasticHumansKidney NeoplasmsPrecision MedicinePrognosisTranscriptomeclear cell renal cell carcinomametabolomicsmetallomicsprecision medicineproteomicstranscriptomicsVHL

Identifiers

PMID33803184
PMCPMC7999481

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.