Evidence map›Paper›PMID 33798203›Full record

ArticlePloS one2021

Complete chloroplast genomes of Impatiens cyanantha and Impatiens monticola: Insights into genome structures, mutational hotspots, comparative and phylogenetic analysis with its congeneric species.

Chao Luo, Yang Li, Roshani Budhathoki, Jiyuan Shi, Huseyin Yer, Xinyi Li, Bo Yan, Qiong Wang, Yonghui Wen, Meijuan Huang and 1 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. The complete chloroplast genome ofFrontiers in plant science · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Chloroplast Genomes of GenusFrontiers in genetics · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Chao LuoCollege of Landscape Architecture and Horticultural Science, Southwest Forestry University, Kunming, China.
Yang LiCollege of Landscape Architecture and Horticultural Science, Southwest Forestry University, Kunming, China.
Roshani BudhathokiDepartment of Landscape Architecture and Plant Science, University of Connecticut, Storrs, CT, United States of America.
Jiyuan ShiDepartment of Landscape Architecture and Plant Science, University of Connecticut, Storrs, CT, United States of America.
Huseyin YerDepartment of Landscape Architecture and Plant Science, University of Connecticut, Storrs, CT, United States of America.
Xinyi LiCollege of Landscape Architecture and Horticultural Science, Southwest Forestry University, Kunming, China.
Bo YanCollege of Landscape Architecture and Horticultural Science, Southwest Forestry University, Kunming, China.
Qiong WangCollege of Landscape Architecture and Horticultural Science, Southwest Forestry University, Kunming, China.
Yonghui WenCollege of Landscape Architecture and Horticultural Science, Southwest Forestry University, Kunming, China.
Meijuan HuangCollege of Landscape Architecture and Horticultural Science, Southwest Forestry University, Kunming, China.
Haiquan HuangCollege of Landscape Architecture and Horticultural Science, Southwest Forestry University, Kunming, China.
Southwest Forestry University · CNUniversity of Connecticut · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Impatiens L., the largest genus in the family Balsaminaceae with approximately 1000 species, is a controversial and complex genus that includes many economically important species well known for medicinal and ornamental values. However, there is limited knowledge of molecular phylogeny and chloroplast genomics, and uncertainties still exist at a taxonomic level. In this study, we have assembled four chloroplast genomics specimens of Impatiens cyanantha and Impatiens monticola, which are found at the different altitudes of Guizhou and Yunnan in China, and compared them with previously published three wild Balsaminaceae species (Impatiens piufanensis, Impatiens glandlifera, and Hydrocera triflora). The complete chloroplast genome sequences ranged from 152,236 bp (I. piufanensis) to 154,189 bp (H. triflora) and encoded 115 total distinct genes, of which 81 were protein-coding, 30 were distinct transfer RNA genes(tRNA), and 4 were ribosomal RNA genes (rRNA). A comparative analysis of I. cyanantha (Guizhou) vs. I. cyanantha (Yunnan) and I. monticola (Guizhou) vs. I. monticola (Yunnan) revealed minor changes in lengths; however, similar gene contents, gene orders, and GC contents existed among them. Interestingly, highly coding and non-coding genes, and regions matK, psbK, atpH-atpI, trnC-trnT, petN, psbM, atpE, rbcL, accD, psaL, rps3-rps19, ndhG-ndhA,rpl16, rpoB, ndhB, ndhF, ycf1, and ndhH were found, which could be suitable for identification of species and phylogenetic studies. During the comparison between I. cyanantha (Guizhou) and I. cyanantha (Yunnan), we observed that the rps4, ycf2, ndhF, ycf1, and rpoC2 genes underwent positive selection. Meanwhile, in the comparative study of I. monticola (Guizhou) vs. I. monticola (Yunnan), The accD and ycf1 genes were positively selected. Additionally, phylogenetic relationships based on maximum likelihood (ML) and Bayesian inference (BI) among whole chloroplast genomes showed that a sister relationship with I. monticola (Guizhou) and I. monticola (Yunnan) formed a clade with I.piufanensis proving their close connection. Besides, I.cyanantha (Guizhou) and I. cyanantha (Yunnan) formed a clade with I. glandlifera. Along with the findings and the results, the current study might provide valuable significant genomic resources for systematics and evolution of the genus impatiens in different altitudes of regions.

Indexed as

Genome, ChloroplastBalsaminaceaeChloroplastsMutationPhylogenyPlant ProteinsRNA, RibosomalRNA, TransferPlant ProteinsRNA, RibosomalRNA, Transfer

Identifiers

PMID33798203
PMCPMC8018631
OpenAlexW3143623720

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.