Evidence map›Paper›PMID 33797169›Full record

ArticleGenes, brain, and behavior2021

Systems genetic analysis of nicotine withdrawal deficits in hippocampus-dependent learning.

Lisa R Goldberg, Munir Gunes Kutlu, Dana Zeid, Laurel R Seemiller, Thomas J Gould

Open access · bronzeAbstract read
In one paragraph

Article in Genes, brain, and behavior, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Lisa R GoldbergDepartment of Biobehavioral Health, Penn State University, University Park, Pennsylvania, USA.ORCID https://orcid.org/0000-0002-7244-7018
Munir Gunes KutluDepartment of Biobehavioral Health, Penn State University, University Park, Pennsylvania, USA.
Dana ZeidDepartment of Biobehavioral Health, Penn State University, University Park, Pennsylvania, USA.
Laurel R SeemillerDepartment of Biobehavioral Health, Penn State University, University Park, Pennsylvania, USA.
Thomas J GouldDepartment of Biobehavioral Health, Penn State University, University Park, Pennsylvania, USA.
Pennsylvania State University · US

Funding

Research Training in Physiological Adaptations to StressT32GM108563 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI CANTORNA, MARGHERITA T, KORZICK, DONNA HOPE · 2014 to 2023
$2.2M
Gene Variants for Nicotine Withdrawal Deficits in LearningU01DA041632 · NIDA · PENNSYLVANIA STATE UNIVERSITY, THE · PI GOULD, THOMAS J · 2016 to 2020
$1.8M
NIDA NIH HHS 1U01DA041632NIDA NIH HHS U01 DA041632NIGMS NIH HHS T32 GM108563NIGMS NIH HHS T32GM108563Pennsylvania State University Jean Phillips Shibley Endowment
6 · The paper itself

Abstract

Cognitive deficits, such as disrupted learning, are a major symptom of nicotine withdrawal. These deficits are heritable, yet their genetic basis is largely unknown. Our lab has developed a mouse model of nicotine withdrawal deficits in learning, using chronic nicotine exposure via osmotic minipumps and fear conditioning. Here, we utilized the BXD genetic reference panel to identify genetic variants underlying nicotine withdrawal deficits in learning. Male and female mice (n = 6-11 per sex per strain, 31 strains) received either chronic saline or nicotine (6.3 mg/kg per day for 12 days), and were then tested for hippocampus-dependent learning deficits using contextual fear conditioning. Quantitative trait locus (QTL) mapping analyses using GeneNetwork identified a significant QTL on Chromosome 4 (82.13 Mb, LRS = 20.03, p < 0.05). Publicly available hippocampal gene expression data were used to identify eight positional candidates (Snacpc3, Mysm1, Rps6, Plaa, Lurap1l, Slc24a2, Hacd4, Ptprd) that overlapped with our behavioral QTL and correlated with our behavioral data. Overall, this study demonstrates that genetic factors impact cognitive deficits during nicotine withdrawal in the BXD recombinant inbred panel and identifies candidate genes for future research.

Indexed as

BXDeQTLfear conditioninggenetic correlationhippocampuslearningnicotineQTLsystems geneticswithdrawal

Identifiers

PMID33797169
PMCPMC12666787
OpenAlexW3140163609

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.