Evidence map›Paper›PMID 33795742›Full record

ArticleScientific reports2021

Photochemical efficiency correlated with candidate gene expression promote coffee drought tolerance.

Meline de Oliveira Santos, Larissa Sousa Coelho, Gladyston Rodrigues Carvalho, Cesar Elias Botelho, Luana Ferreira Torres, Diego Júnior Martins Vilela, Alan Carvalho Andrade, Vânia Aparecida Silva

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Meline de Oliveira SantosBDTII FAPEMIG/EPAMIG Sul, Campus Universitário UFLA, Lavras, Minas Gerais, Brazil.
Larissa Sousa CoelhoUniversidade Federal de Lavras, Campus Universitário, Lavras, Minas Gerais, Brazil.
Gladyston Rodrigues CarvalhoEmpresa de Pesquisa Agropecuária de Minas Gerais, Epamig Sul, Campus da Universidade Federal Lavras - UFLA, Rodovia Lavras/Ijaci Km 02, Cx. P. 176, Lavras, Minas Gerais, Brazil.
Cesar Elias BotelhoEmpresa de Pesquisa Agropecuária de Minas Gerais, Epamig Sul, Campus da Universidade Federal Lavras - UFLA, Rodovia Lavras/Ijaci Km 02, Cx. P. 176, Lavras, Minas Gerais, Brazil.
Luana Ferreira TorresUniversidade Federal de Lavras, Campus Universitário, Lavras, Minas Gerais, Brazil.
Diego Júnior Martins VilelaEmpresa de Pesquisa Agropecuária de Minas Gerais, Epamig Oeste, Patrocínio, Minas Gerais, Brazil.
Alan Carvalho AndradeEmbrapa Café, Inova Café, Campus Universitário da Universidade Federal de Lavras, Lavras, Minas Gerais, Brazil.
Vânia Aparecida SilvaEmpresa de Pesquisa Agropecuária de Minas Gerais, Epamig Sul, Campus da Universidade Federal Lavras - UFLA, Rodovia Lavras/Ijaci Km 02, Cx. P. 176, Lavras, Minas Gerais, Brazil. vania.silva@epamig.br.
Empresa de Pesquisa Agropecuária de Minas Gerais · BRUniversidade Federal de Lavras · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to identify the correlation between photochemical efficiency and candidate genes expression to elucidate the drought tolerance mechanisms in coffee progenies (Icatu Vermelho IAC 3851-2 × Catimor UFV 1602-215) previously identified as tolerant in field conditions. Four progenies (2, 5, 12 and 15) were evaluated under water-deficit conditions (water deficit imposed 8 months after transplanting seedlings to the pots) and under irrigated system. Evaluations of physiological parameters and expression of candidate genes for drought tolerance were performed. Progeny 5 showed capacity to maintain water potential, which contributed to lower qP variation between irrigated and deficit conditions. However, the increases of qN and NPQ in response to stress indicate that this progeny is photochemically responsive to small variations of Ψam protecting the photosystem and maintaining qP. Data obtained for progeny 12 indicated a lower water status maintenance capacity, but with increased qN and NPQ providing maintenance of the ɸPSII and ETR parameters. A PCA analysis revealed that the genes coding regulatory proteins, ABA-synthesis, cellular protectors, isoforms of ascorbate peroxidase clearly displayed a major response to drought stress and discriminated the progenies 5 and 12 which showed a better photochemical response. The genes CaMYB1, CaERF017, CaEDR2, CaNCED, CaAPX1, CaAPX5, CaGolS3, CaDHN1 and CaPYL8a were up-regulated in the arabica coffee progenies with greater photochemical efficiency under deficit and therefore contributing to efficiency of the photosynthesis in drought tolerant progenies.

Indexed as

DroughtsGene Expression Regulation, PlantAdaptation, BiologicalCoffeaGene Expression ProfilingPhotosynthesisPlant Physiological PhenomenaStress, PhysiologicalTime Factors

Identifiers

PMID33795742
PMCPMC8016967
OpenAlexW3142087374

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.