Evidence map›Paper›PMID 33794364›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2022

Targeted replacement of full-length CFTR in human airway stem cells by CRISPR-Cas9 for pan-mutation correction in the endogenous locus.

Sriram Vaidyanathan, Ron Baik, Lu Chen, Dawn T Bravo, Carlos J Suarez, Shayda M Abazari, Ameen A Salahudeen, Amanda M Dudek, Christopher A Teran, Timothy H Davis and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
5.9field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 63 citations in OpenAlex.

  1. CRISPR for cystic fibrosis: Advances and insights from a systematic review.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Pooled it
  2. Article
  3. Review
  4. Review
  5. Review
  6. A unified genetic perturbation language for human cellular programming.bioRxiv : the preprint server for biology · 2025
    Article
  7. Review
  8. Review
  9. Article
  10. Functional rescue of F508del-CFTR through revertant mutations introduced by CRISPR base editing.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Stem cells, cell therapies, and bioengineering in lung biology and diseases 2023.American journal of physiology. Lung cellular and molecular physiology · 2024
    Review
  16. DNA-PKcs Inhibition Improves Sequential Gene Insertion of the Full-LengthbioRxiv : the preprint server for biology · 2024
    Article
  17. Review
  18. A cystic fibrosis gene editing approach that is on target.Molecular therapy. Nucleic acids · 2024
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 1 country.

Sriram VaidyanathanDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA. Electronic address: svaidy@stanford.edu.
Ron BaikDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Lu ChenDepartment of Internal Medicine, Stanford University, Stanford, CA 94305, USA; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305, USA; Stanford Cancer Institute, Stanford University School of Medicine, Stanford, CA 94305, USA.
Dawn T BravoDepartment of Otolaryngology-Head and Neck Surgery, Stanford, CA 94305, USA.
Carlos J SuarezDepartment of Pathology, Stanford University, Stanford, CA 94305, USA.
Shayda M AbazariDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Ameen A SalahudeenDepartment of Internal Medicine, Stanford University, Stanford, CA 94305, USA.
Amanda M DudekDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Christopher A TeranDepartment of Otolaryngology-Head and Neck Surgery, Stanford, CA 94305, USA.
Timothy H DavisDepartment of Bioengineering, Rice University, Houston, TX 77030, USA.
Ciaran M LeeDepartment of Bioengineering, Rice University, Houston, TX 77030, USA.
Gang BaoDepartment of Bioengineering, Rice University, Houston, TX 77030, USA.
Scott H RandellDepartment of Cell Biology and Physiology, The University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA.
Steven E ArtandiDepartment of Internal Medicine, Stanford University, Stanford, CA 94305, USA; Department of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305, USA; Stanford Cancer Institute, Stanford University School of Medicine, Stanford, CA 94305, USA.
Jeffrey J WineDepartment of Psychology, Stanford University, Stanford, CA 94305, USA.
Calvin J KuoDepartment of Internal Medicine, Stanford University, Stanford, CA 94305, USA.
Tushar J DesaiDepartment of Internal Medicine, Stanford University, Stanford, CA 94305, USA.
Jayakar V NayakDepartment of Otolaryngology-Head and Neck Surgery, Stanford, CA 94305, USA.
Zachary M SellersDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA.
Matthew H PorteusDepartment of Pediatrics, Stanford University, Stanford, CA 94305, USA. Electronic address: mporteus@stanford.edu.
Stanford University · USStanford Medicine · USRice University · USUniversity of North Carolina at Chapel Hill · US

Funding

Translational Oncology Research Program (Project-005)P30CA124435 · NCI · STANFORD UNIVERSITY · PI Vittorio Sebastiano · 2007 to 2026
$71.4M
Vector CoreP30DK065988 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Martina Gentzsch · 2004 to 2026
$26.5M
Stanford/UNC Biomimetic U19 Research CenterU19AI116484 · NIAID · STANFORD UNIVERSITY · PI AMIEVA, MANUEL R · 2015 to 2025
$13.5M
Regulation of actively proliferating and quiescent intestinal stem cellsU01DK085527 · NIDDK · STANFORD UNIVERSITY · PI KUO, CALVIN J · 2009 to 2023
$6.9M
Intestinal Stem Cell Consortium Coordinating CenterU01DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2009 to 2018
$6.5M
REVERSING CELLULAR IMMORTALITY IN CANCERR35CA197563 · NCI · STANFORD UNIVERSITY · PI ARTANDI, STEVEN E · 2015 to 2021
$6.4M
Organoid-based Discovery of Oncogenic Drivers and Treatment Resistance MechanismsU01CA217851 · NCI · STANFORD UNIVERSITY · PI CURTIS, CHRISTINA N, JI, HANLEE P · 2017 to 2021
$4.7M
Functional Analysis of Oncogenic Networks in Primary OrganoidsU01CA176299 · NCI · STANFORD UNIVERSITY · PI JI, HANLEE P, KUO, CALVIN J · 2013 to 2016
$3.6M
Optimizing Surgical Transplant of CFTR Gene-Corrected Human Basal Stem Cells to the Upper AirwayR01HL151677 · NHLBI · STANFORD UNIVERSITY · PI NAYAK, JAYAKAR V · 2021 to 2025
$2.4M
Limited Competition for the Continuation of the Intestinal Stem Cell Consortium Coordinating CenterU24DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2019 to 2023
$2.3M
Determining the role of TCAB1 in shaping telomerase functionR01AG056575 · NIA · STANFORD UNIVERSITY · PI ARTANDI, STEVEN E · 2017 to 2021
$2.3M
Modeling Oral Cancer in Primary Organoid CultureK08DE027730 · NIDCR · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SALAHUDEEN, AMEEN A. · 2018 to 2022
$708k
NCI NIH HHS P30 CA124435NCI NIH HHS R35 CA197563NCI NIH HHS U01 CA176299NCI NIH HHS U01 CA217851NHLBI NIH HHS R01 HL151677NIAID NIH HHS U19 AI116484NIA NIH HHS R01 AG056575NIDCR NIH HHS K08 DE027730NIDDK NIH HHS K08 DK124684NIDDK NIH HHS P30 DK065988NIDDK NIH HHS U01 DK085527NIDDK NIH HHS U01 DK085532NIDDK NIH HHS U24 DK085532
6 · The paper itself

Abstract

Cystic fibrosis (CF) is a monogenic disease caused by impaired production and/or function of the CF transmembrane conductance regulator (CFTR) protein. Although we have previously shown correction of the most common pathogenic mutation, there are many other pathogenic mutations throughout the CF gene. An autologous airway stem cell therapy in which the CFTR cDNA is precisely inserted into the CFTR locus may enable the development of a durable cure for almost all CF patients, irrespective of the causal mutation. Here, we use CRISPR-Cas9 and two adeno-associated viruses (AAVs) carrying the two halves of the CFTR cDNA to sequentially insert the full CFTR cDNA along with a truncated CD19 (tCD19) enrichment tag in upper airway basal stem cells (UABCs) and human bronchial epithelial cells (HBECs). The modified cells were enriched to obtain 60%-80% tCD19

Indexed as

Cystic FibrosisCystic Fibrosis Transmembrane Conductance RegulatorCRISPR-Cas SystemsEpithelial CellsHumansMutationStem CellsCFTR protein, humanCystic Fibrosis Transmembrane Conductance Regulatorairway stem cell therapyCFCFTR correctionCRISPR-Cas9cystic fibrosisgenome editing for CFuniversal CFTR correction

Identifiers

PMID33794364
PMCPMC8753290
OpenAlexW3143175470

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.