Evidence map›Paper›PMID 33794197›Full record

ArticleExperimental eye research2021

Model-based comparison of current flow in rod bipolar cells of healthy and early-stage degenerated retina.

Pragya Kosta, Ege Iseri, Kyle Loizos, Javad Paknahad, Rebecca L Pfeiffer, Crystal L Sigulinsky, James R Anderson, Bryan W Jones, Gianluca Lazzi

Open access · greenAbstract readComparative Study
In one paragraph

Article in Experimental eye research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Impact of Retinal Degeneration on Response of ON and OFF Cone Bipolar Cells to Electrical Stimulation.IEEE transactions on neural systems and rehabilitation engineering : a publication of the IEEE Engineering in Medicine and Biology Society · 2023
    Article
  6. Article
  7. Article
  8. Modeling ON Cone Bipolar Cells for Electrical Stimulation.Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2021
    Article
  9. A Computational Model Simulates Light-Evoked Responses in the Retinal Cone Pathway.Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Pragya KostaDepartment of Electrical and Computer Engineering, University of Utah, Salt Lake City, UT, USA. Electronic address: pragya.kosta@utah.edu.
Ege IseriDepartment of Biomedical Engineering, University of Southern California, Los Angeles, CA, USA.
Kyle LoizosInstitute for Technology and Medical Systems Innovation (ITEMS), Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Javad PaknahadDepartment of Electrical Engineering, University of Southern California, Los Angeles, CA, USA.
Rebecca L PfeifferJohn Moran Eye Center at the University of Utah, Salt Lake City, UT, USA.
Crystal L SigulinskyJohn Moran Eye Center at the University of Utah, Salt Lake City, UT, USA.
James R AndersonJohn Moran Eye Center at the University of Utah, Salt Lake City, UT, USA.
Bryan W JonesJohn Moran Eye Center at the University of Utah, Salt Lake City, UT, USA. Electronic address: bryan.jones@m.cc.utah.edu.
Gianluca LazziDepartment of Biomedical Engineering, University of Southern California, Los Angeles, CA, USA; Institute for Technology and Medical Systems Innovation (ITEMS), Keck School of Medicine, University of Southern California, Los Angeles, CA, USA; Department of Electrical Engineering, University of Southern California, Los Angeles, CA, USA; Department of Ophthalmology, University of Southern California, Los Angeles, CA, USA. Electronic address: lazzi@usc.edu.
University of Utah · USUniversity of Southern California · US

Funding

University of Utah, Core Vision Research GrantP30EY014800 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Bryan William Jones · 2005 to 2026
$14.6M
Retinal RemodelingR01EY015128 · NEI · UNIVERSITY OF UTAH · PI JONES, BRYAN WILLIAM · 2004 to 2021
$7.0M
Retinal CircuitryR01EY028927 · NEI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Bryan William Jones · 2019 to 2026
$5.2M
Connectomes and Computational Models of Degenerated Retina for Retinal Prosthetic DesignR21EY028744 · NEI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LAZZI, GIANLUCA · 2018 to 2019
$392k
NEI NIH HHS P30 EY014800NEI NIH HHS R01 EY015128NEI NIH HHS R01 EY028927NEI NIH HHS R21 EY028744
6 · The paper itself

Abstract

Retinal degenerative diseases, such as retinitis pigmentosa, are generally thought to initiate with the loss of photoreceptors, though recent work suggests that plasticity and remodeling occurs prior to photoreceptor cell loss. This degeneration subsequently leads to death of other retinal neurons, creating functional alterations and extensive remodeling of retinal networks. Retinal prosthetic devices stimulate the surviving retinal cells by applying external current using implanted electrodes. Although these devices restore partial vision, the quality of restored vision is limited. Further knowledge about the precise changes in degenerated retina as the disease progresses is essential to understand how current flows in retinas undergoing degenerative disease and to improve the performance of retinal prostheses. We developed computational models that describe current flow from rod photoreceptors to rod bipolar cells (RodBCs) in the healthy and early-stage degenerated retina. Morphologically accurate models of retinal cells with their synapses are constructed based on retinal connectome datasets, created using serial section transmission electron microscopy (TEM) images of 70 nm-thick slices of either healthy (RC1) or early-stage degenerated (RPC1) rabbit retina. The passive membrane and active ion currents of each cell are implemented using conductance-based models in the Neuron simulation environment. In response to photocurrent input at rod photoreceptors, the simulated membrane potential at RodBCs in early degenerate tissue is approximately 10-20 mV lower than that of RodBCs of that observed in wild type retina. Results presented here suggest that although RodBCs in RPC1 show early, altered morphology compared to RC1, the lower membrane potential is primarily a consequence of reduced rod photoreceptor input to RodBCs in the degenerated retina. Frequency response and step input analyses suggest that individual cell responses of RodBCs in either healthy or early-degenerated retina, prior to substantial photoreceptor cell loss, do not differ significantly.

Indexed as

Computer SimulationAnimalsComputational BiologyConnectomeNeuronal PlasticityRabbitsRetinaRetinal Bipolar CellsRetinal DegenerationRetinal Rod Photoreceptor CellsSignal TransductionSynapsesComputational modelingDegenerated retinaNeurodegenerationNeuronal modelingRetinal degenerationRetinitis pigmentosaRod bipolar cellsRod pathways

Identifiers

PMID33794197
PMCPMC8187309
OpenAlexW3144335503

What OpenQuestion holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.