Evidence map›Paper›PMID 33793955›Full record

ArticlePlant physiology2021

Transcriptional reprogramming of xylem cell wall biosynthesis in tension wood.

Baoguang Liu, Juan Liu, Jing Yu, Zhifeng Wang, Yi Sun, Shuang Li, Ying-Chung Jimmy Lin, Vincent L Chiang, Wei Li, Jack P Wang

Abstract read
In one paragraph

Article in Plant physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed.

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  12. GDSL inInternational journal of molecular sciences · 2024
    Article
  13. Ectopic Expression ofInternational journal of molecular sciences · 2024
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Frontiers in plant science · 2023
    Article
  19. Recent genome resequencing paraded COBRA-Frontiers in plant science · 2023
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Baoguang LiuState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-0282-0083
Juan LiuState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.
Jing YuState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.
Zhifeng WangState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-1153-4337
Yi SunState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.
Shuang LiState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0003-2352-2904
Ying-Chung Jimmy LinDepartment of Life Sciences, College of Life Science, National Taiwan University, Taipei 10617, Taiwan.ORCID 0000-0001-7120-4690
Vincent L ChiangState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-7152-9601
Wei LiState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-4407-9334
Jack P WangState Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China.ORCID 0000-0002-5392-0076

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tension wood (TW) is a specialized xylem tissue developed under mechanical/tension stress in angiosperm trees. TW development involves transregulation of secondary cell wall genes, which leads to altered wood properties for stress adaptation. We induced TW in the stems of black cottonwood (Populus trichocarpa, Nisqually-1) and identified two significantly repressed transcription factor (TF) genes: class B3 heat-shock TF (HSFB3-1) and MYB092. Transcriptomic analysis and chromatin immunoprecipitation (ChIP) were used to identify direct TF-DNA interactions in P. trichocarpa xylem protoplasts overexpressing the TFs. This analysis established a transcriptional regulatory network in which PtrHSFB3-1 and PtrMYB092 directly activate 8 and 11 monolignol genes, respectively. The TF-DNA interactions were verified for their specificity and transactivator roles in 35 independent CRISPR-based biallelic mutants and overexpression transgenic lines of PtrHSFB3-1 and PtrMYB092 in P. trichocarpa. The gene-edited trees (mimicking the repressed PtrHSFB3-1 and PtrMYB092 under tension stress) have stem wood composition resembling that of TW during normal growth and under tension stress (i.e., low lignin and high cellulose), whereas the overexpressors showed an opposite effect (high lignin and low cellulose). Individual overexpression of the TFs impeded lignin reduction under tension stress and restored high levels of lignin biosynthesis in the TW. This study offers biological insights to further uncover how metabolism, growth, and stress adaptation are coordinately regulated in trees.

Indexed as

Gene Expression Regulation, PlantCell WallPopulusTranscription, GeneticWoodXylem

Identifiers

PMID33793955
PMCPMC8154086

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.