Evidence map›Paper›PMID 33793664›Full record

ArticlePloS one2021

Partial DnaK protein expression from Coxiella-like endosymbiont of Rhipicephalus annulatus tick.

Pornpiroon Nooroong, Wachareeporn Trinachartvanit, Visut Baimai, Panat Anuracpreeda, Arunee Ahantarig

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 52% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Recent Advances on the Innate Immune Response toFrontiers in cellular and infection microbiology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Pornpiroon NooroongDepartment of Biology, Biodiversity Research Cluster, Faculty of Science, Mahidol University, Bangkok, Thailand.
Wachareeporn TrinachartvanitDepartment of Biology, Biodiversity Research Cluster, Faculty of Science, Mahidol University, Bangkok, Thailand.
Visut BaimaiDepartment of Biology, Biodiversity Research Cluster, Faculty of Science, Mahidol University, Bangkok, Thailand.
Panat AnuracpreedaInstitute of Molecular Biosciences, Mahidol University, Salaya, Nakhon Pathom, Thailand.
Arunee AhantarigDepartment of Biology, Biodiversity Research Cluster, Faculty of Science, Mahidol University, Bangkok, Thailand.ORCID 0000-0003-4252-9968
Mahidol University · TH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Q fever is one of the most important zoonotic diseases caused by the obligate intracellular bacteria, Coxiella burnetii. This bacterial infection has been frequently reported in both humans and animals, especially ruminants. Ticks are important ectoparasite and serve as reservoir hosts of Coxiella-like endosymbionts (CLEs). In this study, we have attempted to express chaperone-coding genes from CLEs of Rhipicephalus annulatus ticks collected fromcow path. The partial DnaK coding sequence has been amplified and expressed by Escherichia coli. Amino acid sequences have been analyzed by MS-MS spectrometry and the UniProt database. Despites nucleotide sequences indicating high nucleotide variation and diversity, many nucleotide substitutions are synonymous. In addition, amino acid substitutions compensate for the physicochemical properties of the original amino acids. Immune Epitope Database and Analysis Resource (IEDB-AR) was employed to indicate the antigenicity of the partial DnaK protein and predict the epitopes of B-and T-cells. Interestingly, some predicted HLA-A and B alleles of the MHC-I and HLA-DR alleles belonging to MHC-II were similar to T-cell responses to C. burnetii in Q fever patients. Therefore, the partial DnaK protein of CLE from R. annulatus could be considered a vaccine candidate and immunogenic marker with future prospects.

Indexed as

Adenosine TriphosphatasesAmino Acid SequenceAnimalsBacterial ProteinsCoxiella burnetiiDatabases, GeneticDNA, BacterialEpitopesHaplotypesMutationPhylogenyRecombinant ProteinsRhipicephalusSymbiosisAdenosine TriphosphatasesBacterial ProteinsDNA, BacterialEpitopesRecombinant Proteins

Identifiers

PMID33793664
PMCPMC8016282
OpenAlexW3152447721

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.