Evidence map›Paper›PMID 33792774›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021

Identification of three closely linked loci conferring broad-spectrum Phytophthora sojae resistance in soybean variety Tosan-231.

Jun-Ichi Matsuoka, Mami Takahashi, Tetsuya Yamada, Yuhi Kono, Naohiro Yamada, Koji Takahashi, Jouji Moriwaki, Hajime Akamatsu

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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  6. Breeding for disease resistance in soybean: a global perspective.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Jun-Ichi MatsuokaHokuriku Research Center, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 1-2-1 Inada, Joetsu, Niigata, 943-0193, Japan. matsuokaj518@affrc.go.jp.ORCID http://orcid.org/0000-0001-6670-6901
Mami TakahashiHokuriku Research Center, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 1-2-1 Inada, Joetsu, Niigata, 943-0193, Japan.
Tetsuya YamadaInstitute of Crop Science, NARO, 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan.
Yuhi KonoHokuriku Research Center, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 1-2-1 Inada, Joetsu, Niigata, 943-0193, Japan.
Naohiro YamadaNagano Vegetable and Ornamental Crops Experiment Station, 1066-1 Souga, Shiojiri, Nagano, 399-646, Japan.
Koji TakahashiInstitute of Crop Science, NARO, 3-1-3 Kannondai, Tsukuba, Ibaraki, 305-8604, Japan.
Jouji MoriwakiKyushu Okinawa Agricultural Research Center, NARO, 1823-1 Miimachi, Kurume, Fukuoka, 839-8503, Japan.
Hajime AkamatsuHokuriku Research Center, Central Region Agricultural Research Center, National Agriculture and Food Research Organization (NARO), 1-2-1 Inada, Joetsu, Niigata, 943-0193, Japan.
National Agriculture and Food Research Organization · JPInstitute of Crop Science · JPKyushu Okinawa Agricultural Research Center · JPNagano Prefectural Suzaka Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageA variable genomic region containing two Harosoy-derived loci related to Rps7 and one Nemashirazu-derived locus confers broad-spectrum Phytophthora sojae resistance in Tosan-231 and is useful for developing resistant cultivars. We investigated resistance to pathotypically variable Phytophthora sojae isolates in the soybean variety Tosan-231, which has broad-spectrum resistance. Mapping analysis using descendent lines from a cross between Shuurei and Tosan-231 demonstrated that a genomic region between SSR markers BARCSOYSSR_03_0209 and BARCSOYSSR_03_0385 (termed "Region T"), confers broad-spectrum resistance in Tosan-231 and contains three closely linked resistance loci. Inoculation tests with 20 P. sojae isolates of different pathotypes and simple sequence repeat (SSR) analysis of progenitors of Tosan-231 facilitated identification and characterization of Rps genes at the three resistance loci. Two resistance genes, RpsT1 and RpsT2, were found to be derived from Harosoy carrying Rps7. This result suggested two mutually exclusive possibilities: (1) either RpsT1 or RpsT2 is Rps7, and the other is a locally functional novel gene; (2) Rps7 is not a single gene but in fact comprises RpsT1 and RpsT2. The resistance locus containing RpsT3 is derived from Nemashirazu, in which Rps genes have remained poorly defined. Moreover, we identified two genomic regions with relatively high recombination frequencies on the basis of mapping information and proposed a strategy to readily assemble useful resistance genes in or around Region T.

Indexed as

Chromosome MappingDisease ResistanceGenes, PlantGlycine maxPhytophthoraPlant Diseases

Identifiers

PMID33792774
OpenAlexW3146600830

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.