Evidence map›Paper›PMID 33792563›Full record

ArticleThe Journal of clinical investigation2021

Genomic variants within chromosome 14q32.32 regulate bone mass through MARK3 signaling in osteoblasts.

Qian Zhang, Larry D Mesner, Gina M Calabrese, Naomi Dirckx, Zhu Li, Angela Verardo, Qian Yang, Robert J Tower, Marie-Claude Faugere, Charles R Farber and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of clinical investigation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
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  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Qian ZhangDepartment of Orthopaedic Surgery, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Larry D MesnerDepartments of Public Health Genomics and Biochemistry and Molecular Genetics, Center for Public Health Genomics, School of Medicine, University of Virginia, Charlottesville, Virginia, USA.
Gina M CalabreseDepartments of Public Health Genomics and Biochemistry and Molecular Genetics, Center for Public Health Genomics, School of Medicine, University of Virginia, Charlottesville, Virginia, USA.
Naomi DirckxDepartment of Orthopaedic Surgery, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Zhu LiDepartment of Orthopaedic Surgery, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Angela VerardoDepartment of Orthopaedic Surgery, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Qian YangDepartment of Orthopaedic Surgery, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Robert J TowerDepartment of Orthopaedic Surgery, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Marie-Claude FaugereDepartment of Medicine, University of Kentucky, Lexington, Kentucky, USA.
Charles R FarberDepartments of Public Health Genomics and Biochemistry and Molecular Genetics, Center for Public Health Genomics, School of Medicine, University of Virginia, Charlottesville, Virginia, USA.
Thomas L ClemensDepartment of Orthopaedic Surgery, Johns Hopkins School of Medicine, Baltimore, Maryland, USA.
Johns Hopkins University · USOffice of Public Health Genomics · USUnited States Department of Veterans Affairs · USUniversity of Kentucky · US

Funding

A Systems Genetics Approach to Identify BMD GenesR01AR071657 · NIAMS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI FARBER, CHARLES R, GERSTENFELD, LOUIS CHARLES · 2018 to 2022
$3.9M
Functional Dissection of the MARK3 GWAS Locus for Bone Mineral DensityR56AR076707 · NIAMS · JOHNS HOPKINS UNIVERSITY · PI CLEMENS, THOMAS L, FARBER, CHARLES R · 2020 to 2020
$549k
Biology of IGFs in BoneI01BX001234 · VA · BALTIMORE VA MEDICAL CENTER · PI CLEMENS, THOMAS L · 2011 to 2019
–
BLR&D Research Career Scientist Award ApplicationIK6BX004984 · VA · BALTIMORE VA MEDICAL CENTER · PI Thomas L Clemens · 2020 to 2026
–
BLRD VA I01 BX001234BLRD VA I01 BX005660BLRD VA IK6 BX004984NIAMS NIH HHS R01 AR071657NIAMS NIH HHS R56 AR076707
6 · The paper itself

Abstract

Bone mineral density (BMD) is a highly heritable predictor of osteoporotic fracture. GWAS have identified hundreds of loci influencing BMD, but few have been functionally analyzed. In this study, we show that SNPs within a BMD locus on chromosome 14q32.32 alter splicing and expression of PAR-1a/microtubule affinity regulating kinase 3 (MARK3), a conserved serine/threonine kinase known to regulate bioenergetics, cell division, and polarity. Mice lacking Mark3 either globally or selectively in osteoblasts have increased bone mass at maturity. RNA profiling from Mark3-deficient osteoblasts suggested changes in the expression of components of the Notch signaling pathway. Mark3-deficient osteoblasts exhibited greater matrix mineralization compared with controls that was accompanied by reduced Jag1/Hes1 expression and diminished downstream JNK signaling. Overexpression of Jag1 in Mark3-deficient osteoblasts both in vitro and in vivo normalized mineralization capacity and bone mass, respectively. Together, these findings reveal a mechanism whereby genetically regulated alterations in Mark3 expression perturb cell signaling in osteoblasts to influence bone mass.

Indexed as

Chromosomes, MammalianGenetic VariationProtein Serine-Threonine KinasesAnimalsBone and BonesBone DensityMiceMice, KnockoutOrgan SizeOsteoblastsSignal TransductionMark3 protein, mouseProtein Serine-Threonine KinasesBioinformaticsBone BiologyBone developmentOsteoclast/osteoblast biology

Identifiers

PMID33792563
PMCPMC8011892
OpenAlexW3146974756

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.