Evidence map›Paper›PMID 33792169›Full record

ArticleChemMedChem2021

Structural Basis of Prolyl Hydroxylase Domain Inhibition by Molidustat.

William D Figg, Michael A McDonough, Rasheduzzaman Chowdhury, Yu Nakashima, Zhihong Zhang, James P Holt-Martyn, Alen Krajnc, Christopher J Schofield

Open access · hybridAbstract read
In one paragraph

Article in ChemMedChem, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Structure-guided optimisation ofChemical science · 2023
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Roxadustat: Not just for anemia.Frontiers in pharmacology · 2022
    Review
  13. Review
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 3 countries.

William D FiggDepartment of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.ORCID 0000-0002-5875-2606
Michael A McDonoughDepartment of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.ORCID 0000-0003-4664-6942
Rasheduzzaman ChowdhuryDepartment of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.ORCID 0000-0002-8058-6149
Yu NakashimaDepartment of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.
Zhihong ZhangDepartment of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.
James P Holt-MartynDepartment of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.
Alen KrajncDepartment of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.ORCID 0000-0001-7822-1944
Christopher J SchofieldDepartment of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.ORCID 0000-0002-0290-6565
Mansfield University · US

Funding

Biotechnology and Biological Sciences Research Council BB/L009846/1Cancer Research UK 18245Wellcome TrustWellcome Trust 106244/Z/14/Z
6 · The paper itself

Abstract

Human prolyl-hydroxylases (PHDs) are hypoxia-sensing 2-oxoglutarate (2OG) oxygenases, catalysis by which suppresses the transcription of hypoxia-inducible factor target genes. PHD inhibition enables the treatment of anaemia/ischaemia-related disease. The PHD inhibitor Molidustat is approved for the treatment of renal anaemia; it differs from other approved/late-stage PHD inhibitors in lacking a glycinamide side chain. The first reported crystal structures of Molidustat and IOX4 (a brain-penetrating derivative) complexed with PHD2 reveal how their contiguous triazole, pyrazolone and pyrimidine/pyridine rings bind at the active site. The inhibitors bind to the active-site metal in a bidentate manner through their pyrazolone and pyrimidine nitrogens, with the triazole π-π-stacking with Tyr303 in the 2OG binding pocket. Comparison of the new structures with other PHD inhibitor complexes reveals differences in the conformations of Tyr303, Tyr310, and a mobile loop linking β2-β3, which are involved in dynamic substrate binding/product release.

Indexed as

Dose-Response Relationship, DrugHumansModels, MolecularMolecular StructureProlyl-Hydroxylase InhibitorsProlyl HydroxylasesPyrazolesStructure-Activity RelationshipTriazolesmolidustatProlyl-Hydroxylase InhibitorsProlyl HydroxylasesPyrazolesTriazolesanaemiaenzyme inhibitionhypoxia-inducible factor-alpha (HIF)Molidustatoxygenases

Identifiers

PMID33792169
PMCPMC8359944
OpenAlexW3152343159

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.