Evidence map›Paper›PMID 33791793›Full record

ArticleTree physiology2021

Transcriptome and proteome analysis suggest enhanced photosynthesis in tetraploid Liriodendron sino-americanum.

Tingting Chen, Yu Sheng, Zhaodong Hao, Xiaofei Long, Fangfang Fu, Yang Liu, Zhonghua Tang, Asif Ali, Ye Peng, Yang Liu and 4 more

Open access · greenAbstract read
In one paragraph

Article in Tree physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 31 citations in OpenAlex.

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  10. High-Depth Transcriptome Reveals Differences in Natural HaploidInternational journal of molecular sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Tingting ChenKey Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Yu ShengKey Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Zhaodong HaoKey Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Xiaofei LongKey Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Fangfang FuCollege of Forestry, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Yang LiuSchool of Forestry, Northeast Forestry University, 26 Hexing Rd, Xiangfang District, Harbin 150040, China.
Zhonghua TangCollege of Chemistry, Chemical Engineer and Resource Utilization, Northeast Forestry University, 26 Hexing Rd, Xiangfang District, Harbin 150040, China.
Asif AliKey Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Ye PengCollege of Biology and the Environment, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Yang LiuKey Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Lu LuKey Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Xiangyang HuShanghai Key Laboratory of Bio-Energy Crops, School of Life Sciences, Shanghai University, 266 Jufeng Rd, Baoshan, Shanghai 201900, China.
Jisen ShiKey Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Jinhui ChenKey Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China.
Nanjing Forestry University · CNNortheast Forestry University · CNShanghai University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyploidy generally provides an advantage in phenotypic variation and growth vigor. However, the underlying mechanisms remain poorly understood. The tetraploid Liriodendron sino-americanum (Liriodendron × sinoamericanum P.C Yieh ex C.B. Shang & Zhang R.Wang) exhibits altered morphology compared with its diploid counterpart, including larger, thicker and deeper green leaves, bigger stomata, thicker stems and increased tree height. Such characteristics can be useful in ornamental and industrial applications. To elucidate the molecular mechanisms behind this variation, we performed a comparative transcriptome and proteome analysis. Our transcriptome data indicated that some photosynthesis genes and pathways were differentially altered and enriched in tetraploid L. sino-americanum, mainly related to F-type ATPase, the cytochrome b6/f complex, photosynthetic electron transport, the light harvesting chlorophyll protein complexes, and photosystem I and II. Most of the differentially expressed proteins we could identify are also involved in photosynthesis. Our physiological results showed that tetraploids have an enhanced photosynthetic capacity, concomitant with great levels of sugar and starch in leaves. This suggests that tetraploid L. sino-americanum might experience comprehensive transcriptome reprogramming of genes related to photosynthesis. This study has especially emphasized molecular changes involved in photosynthesis that accompany polyploidy, and provides a possible explanation for the altered phenotype of polyploidy plants in comparison with their diploid form.

Indexed as

LiriodendronTetraploidyChlorophyllPhotosynthesisPlant LeavesProteomeTranscriptomeChlorophyllProteomeLiriodendron sino-americanumphotosyntheticpolyploidproteomicstranscriptomics

Identifiers

PMID33791793
PMCPMC8498940
OpenAlexW3143925251

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.