Evidence map›Paper›PMID 33790007›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Crystal structure of schizorhodopsin reveals mechanism of inward proton pumping.

Akimitsu Higuchi, Wataru Shihoya, Masae Konno, Tatsuya Ikuta, Hideki Kandori, Keiichi Inoue, Osamu Nureki

Open access · greenAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  9. Article
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  11. Progress and Challenges in Archaeal Molecular Biology.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  12. Crystallization of Microbial Rhodopsins.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Akimitsu HiguchiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo, Tokyo 113-0033, Japan.
Wataru ShihoyaDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo, Tokyo 113-0033, Japan; wtrshh9@gmail.com inoue@issp.u-tokyo.ac.jp nureki@bs.s.u-tokyo.ac.jp.ORCID 0000-0003-4813-5740
Masae KonnoThe Institute for Solid State Physics, The University of Tokyo, 277-8581 Kashiwa, Japan.ORCID 0000-0002-0605-1816
Tatsuya IkutaDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo, Tokyo 113-0033, Japan.ORCID 0000-0002-8597-0609
Hideki KandoriDepartment of Life Science and Applied Chemistry, Nagoya Institute of Technology, Showa, 466-8555 Nagoya, Japan.
Keiichi InoueThe Institute for Solid State Physics, The University of Tokyo, 277-8581 Kashiwa, Japan; wtrshh9@gmail.com inoue@issp.u-tokyo.ac.jp nureki@bs.s.u-tokyo.ac.jp.ORCID 0000-0002-6898-4347
Osamu NurekiDepartment of Biological Sciences, Graduate School of Science, The University of Tokyo, Bunkyo, Tokyo 113-0033, Japan; wtrshh9@gmail.com inoue@issp.u-tokyo.ac.jp nureki@bs.s.u-tokyo.ac.jp.ORCID 0000-0003-1813-7008
The University of Tokyo · JPJapan Science and Technology Agency · JPNagoya Institute of Technology · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Schizorhodopsins (SzRs), a new rhodopsin family identified in Asgard archaea, are phylogenetically located at an intermediate position between type-1 microbial rhodopsins and heliorhodopsins. SzRs work as light-driven inward H

Indexed as

Binding SitesEscherichia coliProtein ConformationProton PumpsRhodopsins, MicrobialProton PumpsRhodopsins, Microbialproton pumprhodopsinX-ray crystallography

Identifiers

PMID33790007
PMCPMC8040798
OpenAlexW3142231222

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.