Evidence map›Paper›PMID 33789571›Full record

ArticleBMC bioinformatics2021

An introduction to new robust linear and monotonic correlation coefficients.

Mohammad Tabatabai, Stephanie Bailey, Zoran Bursac, Habib Tabatabai, Derek Wilus, Karan P Singh

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in BMC bioinformatics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
10.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Mohammad TabatabaiMeharry Medical College, Nashville, TN, 37208, USA. mtabatabai@mmc.edu.ORCID http://orcid.org/0000-0002-1631-5264
Stephanie BaileyMeharry Medical College, Nashville, TN, 37208, USA.
Zoran BursacDepartment of Biostatistics, Florida International University, Miami, FL, 33199, USA.
Habib TabatabaiDepartment of Civil and Environmental Engineering, University of Wisconsin Milwaukee, Milwaukee, WI, 53211, USA.
Derek WilusMeharry Medical College, Nashville, TN, 37208, USA.
Karan P SinghDepartment of Epidemiology and Biostatistics, University of Texas Health Sciences Center at Tyler, Tyler, TX, 75708, USA.
Meharry Medical College · USFlorida International University · USThe University of Texas Health Science Center at Tyler · USUniversity of Wisconsin–Milwaukee · US

Funding

The RCMI Program in Health Disparities Research at Meharry Medical College - SupplementU54MD007586 · NIMHD · MEHARRY MEDICAL COLLEGE · PI Samuel Evans Adunyah · 2017 to 2026
$48.2M
Meharry RCMI Program in Women's Health ResearchG12MD007586 · NIMHD · MEHARRY MEDICAL COLLEGE · PI HILDRETH, JAMES E · 2012 to 2016
$7.8M
NIMHD NIH HHS G12 MD007586NIMHD NIH HHS MD007586NIMHD NIH HHS U54 MD007586
6 · The paper itself

Abstract

backgroundThe most common measure of association between two continuous variables is the Pearson correlation (Maronna et al. in Safari an OMC. Robust statistics, 2019. https://login.proxy.bib.uottawa.ca/login?url=https://learning.oreilly.com/library/view/-/9781119214687/?ar&orpq&email=^u). When outliers are present, Pearson does not accurately measure association and robust measures are needed. This article introduces three new robust measures of correlation: Taba (T), TabWil (TW), and TabWil rank (TWR). The correlation estimators T and TW measure a linear association between two continuous or ordinal variables; whereas TWR measures a monotonic association. The robustness of these proposed measures in comparison with Pearson (P), Spearman (S), Quadrant (Q), Median (M), and Minimum Covariance Determinant (MCD) are examined through simulation. Taba distance is used to analyze genes, and statistical tests were used to identify those genes most significantly associated with Williams Syndrome (WS).

resultsBased on the root mean square error (RMSE) and bias, the three proposed correlation measures are highly competitive when compared to classical measures such as P and S as well as robust measures such as Q, M, and MCD. Our findings indicate TBL2 was the most significant gene among patients diagnosed with WS and had the most significant reduction in gene expression level when compared with control (P value = 6.37E-05).

conclusionsOverall, when the distribution is bivariate Log-Normal or bivariate Weibull, TWR performs best in terms of bias and T performs best with respect to RMSE. Under the Normal distribution, MCD performs well with respect to bias and RMSE; but TW, TWR, T, S, and P correlations were in close proximity. The identification of TBL2 may serve as a diagnostic tool for WS patients. A Taba R package has been developed and is available for use to perform all necessary computations for the proposed methods.

Indexed as

Correlation of DataComputer SimulationHumansDissimilarity measuresGene expressionMedian correlationMinimum covariance determinant correlationPearson correlationQuadrant correlationSpearman correlationWilliams syndrome

Identifiers

PMID33789571
PMCPMC8011137
OpenAlexW3145196478

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.