ArticleBMC plant biology2021
Genome-wide identification, characterization and expression analysis of BES1 gene family in tomato.
Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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26 citing papers in PubMed, 58 citations in OpenAlex.
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- Genome-Wide Identification and Expression Profiling ofInternational journal of molecular sciences · 2025Article
- Genome Identification, Expression Profile Analysis, and Abiotic Stress Response Mechanism of LonganInternational journal of molecular sciences · 2025Article
- Genome-Wide Identification, Characterization, and Expression Analysis ofPlants (Basel, Switzerland) · 2025Article
- The BES1/BZR1 transcriptional factor SlBES2 regulates photosynthetic apparatus in tomato fruit.BMC plant biology · 2025Article
- Genome-Wide Identification of theInternational journal of molecular sciences · 2024Article
- Identification of the Brassinazole-Resistant (International journal of molecular sciences · 2024Article
- Genome-Wide Identification, Characterization, and Expression Analysis of theInternational journal of molecular sciences · 2024Article
- Identification and Characterization of the BZR Transcription Factor Genes Family in Potato (Plants (Basel, Switzerland) · 2024Article
- Identification of SRS transcription factor family in Solanum lycopersicum, and functional characterization of their responses to hormones and abiotic stresses.BMC plant biology · 2023Article
- Genome-Wide Identification, Characterization and Expression Analysis of theInternational journal of molecular sciences · 2023Article
- Genomic basis of selective breeding from the closest wild relative of large-fruited tomato.Horticulture research · 2023Article
- Genome-wide identification and expression analysis of BZR gene family and associated responses to abiotic stresses in cucumber (Cucumis sativus L.).BMC plant biology · 2023Article
- Genome Re-Annotation and Transcriptome Analyses ofJournal of fungi (Basel, Switzerland) · 2023Article
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Authors and funding
7 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundAs the key regulators in BR signaling, BES1 family genes regulate thousands of target genes involved in various development processes. So far, the functions of BES1 family are poorly understood in tomato, and a comprehensive genomic and expressional analysis is worth to conduct for this family.
resultsHere, nine SlBES1 family members were identified in tomato and classified into five groups based on the conserved motif, gene structure and phylogenetic analysis. Synteny among tomato, Arabidopsis, pepper and rice were further analyzed to obtain insights into evolutionary characteristics. Several cis-elements related to hormone, stress and plant development were exhibited in the promoter regions of SlBES1 family genes. Subcellular localization showed seven members localized both in the nucleus and cytoplasm, implying the presence of dephosphorylated and phosphorylated form of these seven proteins, furthermore, five of them possessed transcription activation activity whereas the left two functioned as transcriptional repressors. Another two members, however, neither localized in the nucleus nor had transactivation activity. Besides, SlBES1.8 showed flower-specific expression while other members expressed ubiquitously in all organs. Moreover, SlBES1 genes exhibited variational expression in response to nine principal plant hormones. Notably, the expression levels of SlBES1 genes presented a dominant downregulated trend in response to stresses.
conclusionsIn this study, we systematically analyzed the genomic characterization of SlBES1 family, together with the analyses of protein functional features and expression patterns, our results lay a foundation for the functional research of SlBES1 family.
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