Evidence map›Paper›PMID 33784401›Full record

ArticleNucleic acids research2021

Structures of Neisseria gonorrhoeae MtrR-operator complexes reveal molecular mechanisms of DNA recognition and antibiotic resistance-conferring clinical mutations.

Grace A Beggs, Julio C Ayala, Logan G Kavanaugh, Timothy D Read, Grace M Hooks, Maria A Schumacher, William M Shafer, Richard G Brennan

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

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  12. PotentmSphere · 2022
    Article
  13. Transcriptional regulation of theMicrobiology (Reading, England) · 2022
    Review
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Grace A BeggsDepartment of Biochemistry, Duke University School of Medicine, Durham, NC 27710, USA.
Julio C AyalaDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Logan G KavanaughDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Timothy D ReadDepartment of Medicine, and the Emory Antibiotic Resistance Center, Emory University School of Medicine, Atlanta, GA 30322, USA.
Grace M HooksDepartment of Biochemistry, Duke University School of Medicine, Durham, NC 27710, USA.
Maria A SchumacherDepartment of Biochemistry, Duke University School of Medicine, Durham, NC 27710, USA.
William M ShaferDepartment of Microbiology and Immunology, Emory University School of Medicine, Atlanta, GA 30322, USA.
Richard G BrennanDepartment of Biochemistry, Duke University School of Medicine, Durham, NC 27710, USA.
Duke University · USEmory University · US

Funding

GONOCOCCI: GENETICS OF RESISTANCE TO PMN PROTEINSR01AI021150 · NIAID · EMORY UNIVERSITY · PI SHAFER, WILLIAM MAURICE · 1985 to 2025
$5.5M
Deciphering fundamental biological processes involving protein-nucleic acid interactions at the molecular levelR35GM130290 · NIGMS · DUKE UNIVERSITY · PI Maria Schumacher · 2019 to 2026
$4.9M
Gonococci: Genetics of Resistance to PMN ProteinsR37AI021150 · NIAID · EMORY UNIVERSITY · PI SHAFER, WILLIAM MAURICE · 2010 to 2019
$3.9M
X-RAY STUDIES ON BACTERIAL MDR REGULATORSR01AI048593 · NIAID · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI BRENNAN, RICHARD GERALD · 2001 to 2008
$2.5M
BLRD Research Career Scientist Award ApplicationIK6BX005390 · VA · VETERANS HEALTH ADMINISTRATION · PI William Maurice Shafer · 2021 to 2026
–
BLRD VA IK6 BX005390NIAID NIH HHS R01 AI021150NIAID NIH HHS R01 AI048593NIAID NIH HHS R37 AI021150NIGMS NIH HHS R35 GM130290
6 · The paper itself

Abstract

Mutations within the mtrR gene are commonly found amongst multidrug resistant clinical isolates of Neisseria gonorrhoeae, which has been labelled a superbug by the Centers for Disease Control and Prevention. These mutations appear to contribute to antibiotic resistance by interfering with the ability of MtrR to bind to and repress expression of its target genes, which include the mtrCDE multidrug efflux transporter genes and the rpoH oxidative stress response sigma factor gene. However, the DNA-recognition mechanism of MtrR and the consensus sequence within these operators to which MtrR binds has remained unknown. In this work, we report the crystal structures of MtrR bound to the mtrCDE and rpoH operators, which reveal a conserved, but degenerate, DNA consensus binding site 5'-MCRTRCRN4YGYAYGK-3'. We complement our structural data with a comprehensive mutational analysis of key MtrR-DNA contacts to reveal their importance for MtrR-DNA binding both in vitro and in vivo. Furthermore, we model and generate common clinical mutations of MtrR to provide plausible biochemical explanations for the contribution of these mutations to multidrug resistance in N. gonorrhoeae. Collectively, our findings unveil key biological mechanisms underlying the global stress responses of N. gonorrhoeae.

Indexed as

Bacterial ProteinsNeisseria gonorrhoeaeRepressor ProteinsBinding SitesDNA, BacterialDrug Resistance, Multiple, BacterialGene Expression Regulation, BacterialMutationProtein BindingBacterial ProteinsDNA, BacterialmtrR protein, Neisseria gonorrhoeaeRepressor Proteins

Identifiers

PMID33784401
PMCPMC8053128
OpenAlexW3147870042

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.