Evidence map›Paper›PMID 33782558›Full record

ArticleNature microbiology2021

Characterization of antimicrobial-resistant Gram-negative bacteria that cause neonatal sepsis in seven low- and middle-income countries.

Kirsty Sands, Maria J Carvalho, Edward Portal, Kathryn Thomson, Calie Dyer, Chinenye Akpulu, Robert Andrews, Ana Ferreira, David Gillespie, Thomas Hender and 25 more

Open access · hybridAbstract read
In one paragraph

Article in Nature microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 240 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
240citing papers in PubMed, 4 pooled it
60.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

240 citing papers in PubMed, 4 syntheses or guidelines pooled it, 426 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Trial
  6. Trial
  7. Observational
  8. Article
  9. Generating Actionable Data From Antimicrobial Resistance Surveillance: Insights From the Fleming Fund's International Experience.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2026
    Review
  10. Article
  11. Emergence of multidrug resistant Enterobacter spp. in Nigeria: a genomic study.World journal of microbiology & biotechnology · 2026
    Article
  12. Review
  13. Article
  14. Review
  15. Risk factors for multidrug resistance and mortality in healthcare-associated neonatal gram-negative bloodstream infections.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  16. Molecular Characterization and Clinical Outcomes ofChildren (Basel, Switzerland) · 2026
    Article
  17. Article
  18. Article
  19. Article
  20. Article

180 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

35 authors at 16 institutions in 10 countries.

Kirsty Sands *Division of Infection and Immunity, Cardiff University, Cardiff, UK. kirsty.sands@zoo.ox.ac.uk.ORCID http://orcid.org/0000-0001-5049-4481
Maria J Carvalho *Division of Infection and Immunity, Cardiff University, Cardiff, UK. mjcarvalho@ua.pt.ORCID http://orcid.org/0000-0001-6819-927X
Edward PortalDivision of Infection and Immunity, Cardiff University, Cardiff, UK.
Kathryn ThomsonDivision of Infection and Immunity, Cardiff University, Cardiff, UK.
Calie DyerDivision of Infection and Immunity, Cardiff University, Cardiff, UK.
Chinenye AkpuluDivision of Infection and Immunity, Cardiff University, Cardiff, UK.
Robert AndrewsDivision of Infection and Immunity, Cardiff University, Cardiff, UK.
Ana FerreiraDivision of Infection and Immunity, Cardiff University, Cardiff, UK.
David GillespieCentre for Trials Research, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0002-6934-2928
Thomas HenderDivision of Infection and Immunity, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0002-5987-5923
Kerenza HoodCentre for Trials Research, Cardiff University, Cardiff, UK.
Jordan MathiasDivision of Infection and Immunity, Cardiff University, Cardiff, UK.
Rebecca MiltonDivision of Infection and Immunity, Cardiff University, Cardiff, UK.
Maria NietoDivision of Infection and Immunity, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0001-6188-5947
Khadijeh TaiyariCentre for Trials Research, Cardiff University, Cardiff, UK.
Grace J ChanDivision of Medical Critical Care, Boston Children's Hospital, Boston, MA, USA.
Delayehu BekeleDepartment of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA, USA.ORCID http://orcid.org/0000-0002-9243-2622
Semaria SolomonDepartment of Microbiology, Immunology and Parasitology, St Paul's Hospital Millennium Medical College, Addis Ababa, Ethiopia.
Sulagna BasuDivision of Bacteriology, ICMR-National Institute of Cholera and Enteric Diseases, Kolkata, India.
Pinaki ChattopadhyayDepartment of Neonatology, Institute of Postgraduate Medical Education & Research, Kolkata, India.
Suchandra MukherjeeDepartment of Neonatology, Institute of Postgraduate Medical Education & Research, Kolkata, India.
Kenneth IregbuNational Hospital Abuja, Abuja, Nigeria.
Fatima ModibboNational Hospital Abuja, Abuja, Nigeria.
Stella UwaezuokeFederal Medical Centre - Jabi, Abuja, Nigeria.
Rabaab ZahraDepartment of Microbiology, Quaid-i-Azam University, Islamabad, Pakistan.
Haider ShiraziPakistan Institute of Medical Sciences, Islamabad, Pakistan.
Adil MuhammadDepartment of Microbiology, Quaid-i-Azam University, Islamabad, Pakistan.
Jean-Baptiste MazaratiThe National Reference Laboratory, Rwanda Biomedical Centre, Kigali, Rwanda.
Aniceth RucogozaThe National Reference Laboratory, Rwanda Biomedical Centre, Kigali, Rwanda.
Lucie GajuThe National Reference Laboratory, Rwanda Biomedical Centre, Kigali, Rwanda.
Shaheen MehtarUnit of IPC, Stellenbosch University, Cape Town, South Africa.ORCID http://orcid.org/0000-0002-3165-5566
Andre N H BulabulaInfection Control Africa Network, Cape Town, South Africa.
Andrew WhitelawDivision of Medical Microbiology, Stellenbosch University, Cape Town, South Africa.ORCID http://orcid.org/0000-0001-9070-5247
BARNARDS Group
Timothy R WalshDivision of Infection and Immunity, Cardiff University, Cardiff, UK.ORCID http://orcid.org/0000-0003-4315-4096
Cardiff University · GBNational Hospital Abuja · NGRwanda Biomedical Center · RWIneos (United Kingdom) · GBInstitute of Post Graduate Medical Education and Research · INQuaid-i-Azam University · PKStellenbosch University · ZABoston Children's Hospital · USFederal Medical Centre · NGHarvard University · USInstitute of Infection and Immunity · CANational Health Laboratory Service · ZANational Institute of Cholera and Enteric Diseases · INPakistan Institute of Medical Sciences · PKSt. Paul's Hospital Millennium Medical College · ETUniversity of Oxford · GB

Funding

Medical Research Council MR/P007295/1Medical Research Council MR/S013768/1Medical Research Council MR/S013768/2
6 · The paper itself

Abstract

Antimicrobial resistance in neonatal sepsis is rising, yet mechanisms of resistance that often spread between species via mobile genetic elements, ultimately limiting treatments in low- and middle-income countries (LMICs), are poorly characterized. The Burden of Antibiotic Resistance in Neonates from Developing Societies (BARNARDS) network was initiated to characterize the cause and burden of antimicrobial resistance in neonatal sepsis for seven LMICs in Africa and South Asia. A total of 36,285 neonates were enrolled in the BARNARDS study between November 2015 and December 2017, of whom 2,483 were diagnosed with culture-confirmed sepsis. Klebsiella pneumoniae (n = 258) was the main cause of neonatal sepsis, with Serratia marcescens (n = 151), Klebsiella michiganensis (n = 117), Escherichia coli (n = 75) and Enterobacter cloacae complex (n = 57) also detected. We present whole-genome sequencing, antimicrobial susceptibility and clinical data for 916 out of 1,038 neonatal sepsis isolates (97 isolates were not recovered from initial isolation at local sites). Enterobacterales (K. pneumoniae, E. coli and E. cloacae) harboured multiple cephalosporin and carbapenem resistance genes. All isolated pathogens were resistant to multiple antibiotic classes, including those used to treat neonatal sepsis. Intraspecies diversity of K. pneumoniae and E. coli indicated that multiple antibiotic-resistant lineages cause neonatal sepsis. Our results will underpin research towards better treatments for neonatal sepsis in LMICs.

Indexed as

Drug Resistance, Multiple, BacterialAfricaAnti-Bacterial AgentsAsiaBacterial Proteinsbeta-LactamasesDeveloping CountriesGenetic VariationGenome, BacterialGram-Negative BacteriaGram-Negative Bacterial InfectionsHumansInfant, NewbornNeonatal SepsisPhylogenyPlasmidsAnti-Bacterial AgentsBacterial Proteinsbeta-Lactamasescarbapenemase

Identifiers

PMID33782558
PMCPMC8007471
OpenAlexW3151221590

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.