Evidence map›Paper›PMID 33781213›Full record

ArticleBMC plant biology2021

Genome-wide identification and functional characterization of the PheE2F/DP gene family in Moso bamboo.

Long Li, Qianqian Shi, Zhouqi Li, Jian Gao

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  5. Genome Wide Identification and Characterization ofInternational journal of genomics · 2026
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  7. Review
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  9. Identification and expression analysis of theFrontiers in plant science · 2025
    Article
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  15. Genome-Wide Identification ofFrontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Long LiCollege of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Qianqian ShiCollege of Landscape Architecture and Art, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Zhouqi LiCollege of Forestry, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Jian GaoInternational Center for Bamboo and Rattan, Key Laboratory of Bamboo and Rattan Science and Technology, State Forestry Administration, Beijing, China. gaojianicbr@163.com.ORCID http://orcid.org/0000-0001-8948-2613
Northwest A&F University · CNInternational Bamboo and Rattan Organization · CN

Funding

Natural Science Foundation of Shaanxi Province 2019JQ-402Scientific Startup foundation for Doctor of Northwest A&F University Z109021715the Fundamental Research Funds of ICBR 1632018006the National Key point Research and Invention Program of the 13th Five-Year 2018YFD0600101
6 · The paper itself

Abstract

backgroundE2F/DP proteins have been shown to regulate genes implicated in cell cycle control and DNA repair. However, to date, research into the potential role of the Moso bamboo E2F/DP family has been limited.

resultsHere, we identified 23 E2F/DPs in the Moso bamboo genome, including nine E2F genes, six DP genes, eight DEL genes and one gene with a partial E2F domain. An estimation of the divergence time of the paralogous gene pairs suggested that the E2F/DP family expansion primarily occurred through a whole-genome duplication event. A regulatory element and coexpression network analysis indicated that E2F/DP regulated the expression of cell cycle-related genes. A yeast two-hybrid assay and expression analysis based on transcriptome data and in situ hybridization indicated that the PheE2F-PheDP complex played important roles in winter Moso bamboo shoot growth. The qRT-PCR results showed that the PheE2F/DPs exhibited diverse expression patterns in response to drought and salt treatment and diurnal cycles.

conclusionOur findings provide novel insights into the Moso bamboo E2F/DP family and partial experimental evidence for further functional verification of the PheE2F/DPs.

Indexed as

Genome, PlantCircadian RhythmConserved SequenceE2F Transcription FactorsGene Expression ProfilingMultigene FamilyPhylogenyPlant ProteinsPoaceaeReal-Time Polymerase Chain ReactionRegulatory Sequences, Nucleic AcidStress, PhysiologicalTranscription FactorsDP transcription factor, plantE2F Transcription FactorsPlant ProteinsTranscription FactorsBamboo shootCell cycleE2F/DPsExpressionMoso bamboo

Identifiers

PMID33781213
PMCPMC8008544
OpenAlexW3116322390

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.