ArticleBMC genomics2021
Genome-wide identification and expression analysis of the B-box transcription factor gene family in grapevine (Vitis vinifera L.).
Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed.
- Comprehensive genome-wide identification, structural analysis, and cold-responsive expression profiling of double B-box (DBB) transcription factors in melon (Cucumis melo L.).BMC plant biology · 2026Article
- Genome-wide identification of the BBX gene family in kiwifruit and analysis of its expression responses to multiple types of stress.BMC genomics · 2026Article
- A conserved structural framework accompanies evolutionary divergence and expression specialization in the grapevine SKP1 family.Frontiers in plant science · 2026Article
- Transcription-metabolism association analysis of molecular mechanisms in sweet orange plants in response to boron deficiency.BMC genomics · 2025Article
- Genome-wide identification of BBX gene family and its function in defense of necrotrophic fungus Alternaria sp. in Chrysanthemum.BMC genomics · 2025Article
- Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2025Article
- Identification of the BBX gene family in blueberry at different chromosome ploidy levels and fruit development and response under stress.BMC genomics · 2025Article
- A B-Box (BBX) Transcription Factor from Cucumber, CsCOL9 Positively Regulates Resistance of Host Plant toInternational journal of molecular sciences · 2025Article
- Genome-Wide Analysis ofInternational journal of molecular sciences · 2024Article
- Genome-wide identification of B-box zinc finger (BBX) gene family in Medicago sativa and their roles in abiotic stress responses.BMC genomics · 2024Article
- Analysis of GATA transcription factors and their expression patterns under abiotic stress in grapevine (Vitis vinifera L.).BMC plant biology · 2023Article
- Comprehensive Characterization of B-Box Zinc Finger Genes inPlants (Basel, Switzerland) · 2023Article
- Characterization and the comprehensive expression analysis of tobacco valine-glutamine genes in response to trichomes development and stress tolerance.Botanical studies · 2023Article
- Transcription FactorInternational journal of molecular sciences · 2023Article
- Genome-Wide Analysis of theInternational journal of molecular sciences · 2023Article
- The Function ofGenes · 2022Article
- Article
- Genome-Wide Characterization and Anthocyanin-Related Expression Analysis of theFrontiers in genetics · 2022Article
- Overexpression of the Apple (International journal of molecular sciences · 2021Article
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Authors and funding
10 authors.
Funding
Abstract
backgroundB-box (BBX) zinc-finger transcription factors play important roles in plant growth, development, and stress response. Although these proteins have been studied in model plants such as Arabidopsis thaliana or Oryza sativa, little is known about the evolutionary history or expression patterns of BBX proteins in grapevine (Vitis vinifera L.).
resultsWe identified a total of 25 VviBBX genes in the grapevine genome and named them according to the homology with Arabidopsis. These proteins were classified into five groups on the basis of their phylogenetic relationships, number of B-box domains, and presence or absence of a CCT domain or VP motif. BBX proteins within the same group showed similar exon-intron structures and were unevenly distributed in grapevine chromosomes. Synteny analyses suggested that only segmental duplication events contributed to the expansion of the VviBBX gene family in grapevine. The observed syntenic relationships between some BBX genes from grapevine and Arabidopsis suggest that they evolved from a common ancestor. Transcriptional analyses showed that the grapevine BBX genes were regulated distinctly in response to powdery mildew infection and various phytohormones. Moreover, the expression levels of a subset of BBX genes in ovules were much higher in seedless grapevine cultivars compared with seeded cultivars during ovule development, implying a potential role in seed abortion. Additionally, VviBBX8, VquBBX15a and VquBBX29b were all located in the nucleus and had transcriptional activity except for VquBBX29b.
conclusionsThe results of this study establish the genome-wide analysis of the grapevine BBX family and provide a framework for understanding the biological roles of BBX genes in grapevine.
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