Evidence map›Paper›PMID 33773040›Full record

ArticleJournal of thrombosis and haemostasis : JTH2021

F5-Atlanta: A novel mutation in F5 associated with enhanced East Texas splicing and FV-short production.

Karen L Zimowski, Teodolinda Petrillo, Michelle D Ho, Julie Wechsler, Jordan E Shields, Gabriela Denning, Navdeep Jhita, Angel A Rivera, Miguel A Escobar, Christine L Kempton and 2 more

Open access · greenAbstract read
In one paragraph

Article in Journal of thrombosis and haemostasis : JTH, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Factor V variants in bleeding and thrombosis.Research and practice in thrombosis and haemostasis · 2024
    Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Factor V east Texas variant causes bleeding in a three-generation family.Journal of thrombosis and haemostasis : JTH · 2022
    Article
  11. F5-Atlanta: Factor V-short strikes again.Journal of thrombosis and haemostasis : JTH · 2021
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Karen L ZimowskiAflac Cancer and Blood Disorders Center, Emory University/Children's Healthcare of Atlanta, Atlanta, Georgia, USA.ORCID 0000-0003-3819-7200
Teodolinda PetrilloThe Children's Hospital of Philadelphia, The Raymond G. Perelman Center for Cellular and Molecular Therapeutics, Philadelphia, Pennsylvania, USA.
Michelle D HoThe Children's Hospital of Philadelphia, The Raymond G. Perelman Center for Cellular and Molecular Therapeutics, Philadelphia, Pennsylvania, USA.
Julie WechslerAflac Cancer and Blood Disorders Center, Emory University/Children's Healthcare of Atlanta, Atlanta, Georgia, USA.
Jordan E ShieldsAflac Cancer and Blood Disorders Center, Emory University/Children's Healthcare of Atlanta, Atlanta, Georgia, USA.
Gabriela DenningExpression Therapeutics, Tucker, Georgia, USA.
Navdeep JhitaExpression Therapeutics, Tucker, Georgia, USA.
Angel A RiveraExpression Therapeutics, Tucker, Georgia, USA.
Miguel A EscobarUniversity of Texas Houston Health Science Center, Houston, Texas, USA.
Christine L KemptonDepartment of Hematology and Medical Oncology, Emory University School of Medicine, Atlanta, Georgia, USA.
Rodney M CamireThe Children's Hospital of Philadelphia, The Raymond G. Perelman Center for Cellular and Molecular Therapeutics, Philadelphia, Pennsylvania, USA.
Christopher B DoeringAflac Cancer and Blood Disorders Center, Emory University/Children's Healthcare of Atlanta, Atlanta, Georgia, USA.
Emory University · USChildren's Hospital of Philadelphia · USExpression Therapeutics (United States) · USThe University of Texas Health Science Center at Houston · US

Funding

Translating Mechanistic Insights into Intrinsic Xase FunctionP01HL139420 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI Sriram Krishnaswamy · 2018 to 2026
$22.4M
Ancestral Sequence Reconstruction Engineering of Coagulation FactorsR01HL137128 · NHLBI · EMORY UNIVERSITY · PI DOERING, CHRISTOPHER BRADLEY, SPENCER, H TRENT · 2017 to 2019
$1.1M
Mechanisms Regulating Factor V Activation and FunctionR01HL131833 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI CAMIRE, RODNEY M · 2016 to 2018
$946k
Bioengineering Factor VIII through Ancestral ReconstructionR56HL131059 · NHLBI · EMORY UNIVERSITY · PI DOERING, CHRISTOPHER BRADLEY, SPENCER, H TRENT · 2016 to 2016
$385k
National Institutes of Health/National Heart, Lung and Blood Institute P01-HL139420National Institutes of Health/National Heart, Lung and Blood Institute R01-137128National Institutes of Health/National Heart, Lung and Blood Institute R01-HL131833National Institutes of Health/National Heart, Lung and Blood Institute R56-HL131059NHF-Shire Clinical Fellowship ProgramNHLBI NIH HHS P01 HL139420NHLBI NIH HHS R01 HL131833NHLBI NIH HHS R01 HL137128NHLBI NIH HHS R56 HL131059Pfizer Global ASPIRE Gene and anti-TFPI Therapies Hemophilia Program WI242430
6 · The paper itself

Abstract

backgroundElucidating the molecular pathogenesis underlying East Texas bleeding disorder (ET) led to the discovery of alternatively spliced F5 transcripts harboring large deletions within exon 13. These alternatively spliced transcripts produce a shortened form of coagulation factor V (FV) in which a large portion of its B-domain is deleted. These FV isoforms bind tissue factor pathway inhibitor alpha (TFPIα) with high affinity, prolonging its circulatory half-life and enhancing its anticoagulant effects. While two missense pathogenic variants highlighted this alternative splicing event, similar internally deleted FV proteins are found in healthy controls.

objectiveWe identified a novel heterozygous 832 base pair deletion within F5 exon 13, termed F5-Atlanta (F5-ATL), in a patient with severe bleeding. Our objective is to investigate the effect of this deletion on F5 and FV expression. METHODS &

resultsAssessment of patient plasma revealed markedly elevated levels of total and free TFPI and a FV isoform similar in size to the FV-short described in ET. Sequencing analyses of cDNA revealed the presence of a transcript alternatively spliced using the ET splice sites, thereby removing the F5-ATL deletion. This alternative splicing pattern was recapitulated by heterologous expression in mammalian cells.

conclusionsThese findings support a mechanistic model consisting of cis-acting regulatory sequences encoded within F5 exon 13 that control alternative splicing at the ET splice sites and thereby regulate circulating FV-short and TFPIα levels.

Indexed as

Blood Coagulation DisordersFactor VAlternative SplicingAnimalsExonsHumansMutationRNA SplicingFactor Valternative splicingblood coagulation disorderfactor Vhemostasistranscriptome

Identifiers

PMID33773040
PMCPMC12720280
OpenAlexW3141349403

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.