Evidence map›Paper›PMID 33772158›Full record

ArticleEuropean journal of human genetics : EJHG2021

Identification of novel locus associated with coronary artery aneurysms and validation of loci for susceptibility to Kawasaki disease.

Clive Hoggart, Chisato Shimizu, Rachel Galassini, Victoria J Wright, Hannah Shailes, Evan Bellos, Jethro A Herberg, Andrew J Pollard, Daniel O'Connor, Shing Wan Choi and 17 more

Open access · hybridAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. New avenues in childhood vasculitis.Pediatric rheumatology online journal · 2025
    Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. The etiologies of Kawasaki disease.The Journal of clinical investigation · 2024
    Review
  14. Review
  15. Review
  16. Article
  17. Genomics elucidates both common and rare disease aetiology.European journal of human genetics : EJHG · 2021
    Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 9 institutions in 5 countries.

Clive Hoggart *Section of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK. clivehoggart@gmail.com.ORCID http://orcid.org/0000-0002-0482-0052
Chisato Shimizu *Department of Pediatrics, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-3149-2699
Rachel GalassiniSection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK.
Victoria J WrightSection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK.ORCID http://orcid.org/0000-0001-7826-1516
Hannah ShailesSection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK.
Evan BellosSection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK.ORCID http://orcid.org/0000-0002-3389-5715
Jethro A HerbergSection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK.
Andrew J PollardOxford Vaccine Group, Department of Paediatrics, NIHR Oxford Biomedical Research Centre, University of Oxford, Oxford, UK.
Daniel O'ConnorOxford Vaccine Group, Department of Paediatrics, NIHR Oxford Biomedical Research Centre, University of Oxford, Oxford, UK.ORCID http://orcid.org/0000-0002-6902-9886
Shing Wan ChoiDepartment of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Eleanor G SeabySection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK.
Stephanie MenikouSection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK.
Martin HibberdLondon School of Hygiene and Tropical Medicine, London, UK.
Neneh SallahLondon School of Hygiene and Tropical Medicine, London, UK.
David BurgnerMurdoch Children's Research Institute, Royal Children's Hospital Melbourne, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-8304-4302
Paul BroganInstitute of Child Health, University College London, London, UK.
Harsita PatelSection of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK.
Jihoon KimDepartment of Biomedical Informatics, University of California San Diego, La Jolla, CA, USA.
Adriana H TremouletDepartment of Pediatrics, University of California San Diego, La Jolla, CA, USA.
Eeva SaloDepartment of Paediatrics and Adolescent Medicine, Tyks University Hospital, Turku, Finland.
Diana van StijnDepartment of Pediatric Immunology, Rheumatology & Infectious Diseases, Emma Children's Hospital, Amsterdam University Medical Centre, University of Amsterdam, Amsterdam, The Netherlands.
Taco KuijpersDepartment of Pediatric Immunology, Rheumatology & Infectious Diseases, Emma Children's Hospital, Amsterdam University Medical Centre, University of Amsterdam, Amsterdam, The Netherlands.
Jane C Burns *Department of Pediatrics, University of California San Diego, La Jolla, CA, USA.
Michael Levin *Section of Paediatric Infectious Disease, Department of Infectious Disease, Imperial College London, London, UK.
International Kawasaki Disease Genetics Consortium
UK Kawasaki Disease Genetics Consortium
EUCLIDS Consortium
Imperial College London · GBUniversity of California San Diego · USLondon School of Hygiene & Tropical Medicine · GBSanquin · NLUniversity of Oxford · GBIcahn School of Medicine at Mount Sinai · USRoyal Children's Hospital · AUTurku University Hospital · FIUniversity College London · GB

Funding

UW Center for Mendelian GenomicsUM1HG006493 · NHGRI · UNIVERSITY OF WASHINGTON · PI BAMSHAD, MICHAEL JOSEPH, LEAL, SUZANNE M · 2016 to 2020
$15.3M
Department of Health WMNP_P69099NHGRI NIH HHS UM1 HG006493
6 · The paper itself

Abstract

Kawasaki disease (KD) is a paediatric vasculitis associated with coronary artery aneurysms (CAA). Genetic variants influencing susceptibility to KD have been previously identified, but no risk alleles have been validated that influence CAA formation. We conducted a genome-wide association study (GWAS) for CAA in KD patients of European descent with 200 cases and 276 controls. A second GWAS for susceptibility pooled KD cases with healthy paediatric controls from vaccine trials in the UK (n = 1609). Logistic regression mixed models were used for both GWASs. The susceptibility GWAS was meta-analysed with 400 KD cases and 6101 controls from a previous European GWAS, these results were further meta-analysed with Japanese GWASs at two putative loci. The CAA GWAS identified an intergenic region of chromosome 20q13 with multiple SNVs showing genome-wide significance. The risk allele of the most associated SNV (rs6017006) was present in 13% of cases and 4% of controls; in East Asian 1000 Genomes data, the allele was absent or rare. Susceptibility GWAS with meta-analysis with previously published European data identified two previously associated loci (ITPKC and FCGR2A). Further meta-analysis with Japanese GWAS summary data from the CASP3 and FAM167A genomic regions validated these loci in Europeans showing consistent effects of the top SNVs in both populations. We identified a novel locus for CAA in KD patients of European descent. The results suggest that different genes determine susceptibility to KD and development of CAA and future work should focus on the function of the intergenic region on chromosome 20q13.

Indexed as

Polymorphism, Single NucleotideQuantitative Trait LociCaspase 3Coronary AneurysmHumansIntrinsically Disordered ProteinsMucocutaneous Lymph Node SyndromePhosphotransferases (Alcohol Group Acceptor)ProteinsReceptors, IgGCASP3 protein, humanCaspase 3FAM167A protein, humanFCGR2A protein, humanInositol 1,4,5-trisphosphate 3-kinaseIntrinsically Disordered ProteinsPhosphotransferases (Alcohol Group Acceptor)ProteinsReceptors, IgG

Identifiers

PMID33772158
PMCPMC7994355
OpenAlexW3136485021

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.