Evidence map›Paper›PMID 33772005›Full record

ArticleNature communications2021

DNA replication origins retain mobile licensing proteins.

Humberto Sánchez, Kaley McCluskey, Theo van Laar, Edo van Veen, Filip M Asscher, Belén Solano, John F X Diffley, Nynke H Dekker

Abstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
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  11. Multiple pathways for licensing human replication origins.bioRxiv : the preprint server for biology · 2024
    Article
  12. Review
  13. Article
  14. Review
  15. Review
  16. Article
  17. Changing protein-DNA interactions promote ORC binding-site exchange during replication origin licensing.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Humberto SánchezDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands.ORCID 0000-0003-2137-1233
Kaley McCluskeyDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands.
Theo van LaarDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands.ORCID 0000-0002-0990-6234
Edo van VeenDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands.ORCID 0000-0003-3509-8151
Filip M AsscherDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands.
Belén SolanoDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands.
John F X DiffleyChromosome Replication Laboratory, Francis Crick Institute, London, UK. John.Diffley@crick.ac.uk.ORCID 0000-0001-5184-7680
Nynke H DekkerDepartment of Bionanoscience, Kavli Institute of Nanoscience, Delft University of Technology, Delft, The Netherlands. n.h.dekker@tudelft.nl.ORCID 0000-0003-4029-0973

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA replication in eukaryotes initiates at many origins distributed across each chromosome. Origins are bound by the origin recognition complex (ORC), which, with Cdc6 and Cdt1, recruits and loads the Mcm2-7 (MCM) helicase as an inactive double hexamer during G1 phase. The replisome assembles at the activated helicase in S phase. Although the outline of replisome assembly is understood, little is known about the dynamics of individual proteins on DNA and how these contribute to proper complex formation. Here we show, using single-molecule optical trapping and confocal microscopy, that yeast ORC is a mobile protein that diffuses rapidly along DNA. Origin recognition halts this search process. Recruitment of MCM molecules in an ORC- and Cdc6-dependent fashion results in slow-moving ORC-MCM intermediates and MCMs that rapidly scan the DNA. Following ATP hydrolysis, salt-stable loading of MCM single and double hexamers was seen, both of which exhibit salt-dependent mobility. Our results demonstrate that effective helicase loading relies on an interplay between protein diffusion and origin recognition, and suggest that MCM is stably loaded onto DNA in multiple forms.

Indexed as

AlgorithmsBinding SitesCell Cycle ProteinsDNA-Binding ProteinsDNA, FungalDNA ReplicationMinichromosome Maintenance ProteinsModels, GeneticOrigin Recognition ComplexProtein BindingReplication OriginSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCDC6 protein, S cerevisiaeCell Cycle ProteinsDNA-Binding ProteinsDNA, FungalMinichromosome Maintenance ProteinsOrigin Recognition ComplexSaccharomyces cerevisiae ProteinsTAH11 protein, S cerevisiae

Identifiers

PMID33772005
PMCPMC7998030

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.