Evidence map›Paper›PMID 33771888›Full record

ArticleScience immunology2021

A tumor-specific mechanism of T

Robert I Seed, Kenji Kobayashi, Saburo Ito, Naoki Takasaka, Anthony Cormier, Jillian M Jespersen, Jean Publicover, Suprita Trilok, Alexis J Combes, Nayvin W Chew and 7 more

Open access · greenAbstract read
In one paragraph

Article in Science immunology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 26 citations in OpenAlex.

  1. Regulatory T cells in cancer and inflammation.Signal transduction and targeted therapy · 2026
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  19. Perinatal derivatives: How to best validate their immunomodulatory functions.Frontiers in bioengineering and biotechnology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 1 country.

Robert I SeedDepartment of Pathology, University of California, San Francisco, San Francisco, CA 94110, USA.ORCID 0000-0002-7588-9903
Kenji KobayashiDepartment of Pathology, University of California, San Francisco, San Francisco, CA 94110, USA.ORCID 0000-0002-3908-2811
Saburo ItoDepartment of Pathology, University of California, San Francisco, San Francisco, CA 94110, USA.
Naoki TakasakaDepartment of Pathology, University of California, San Francisco, San Francisco, CA 94110, USA.ORCID 0000-0002-3016-233X
Anthony CormierDepartment of Pathology, University of California, San Francisco, San Francisco, CA 94110, USA.ORCID 0000-0002-2848-9536
Jillian M JespersenDepartment of Medicine and Liver Center, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0002-8231-6978
Jean PublicoverDepartment of Medicine and Liver Center, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0002-8119-5414
Suprita TrilokDepartment of Medicine and Liver Center, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0002-7769-0957
Alexis J CombesDepartment of Pathology, University of California, San Francisco, San Francisco, CA 94110, USA.ORCID 0000-0002-9110-6542
Nayvin W ChewDepartment of Pathology, University of California, San Francisco, San Francisco, CA 94110, USA.
Jocelyne ChapmanDepartment of Gynecology and Oncology, University of California, San Francisco San Francisco, CA 94110, USA.ORCID 0000-0002-4260-3016
Matthew F KrummelDepartment of Pathology, University of California, San Francisco, San Francisco, CA 94110, USA.ORCID 0000-0001-7915-3533
Jianlong LouDepartment of Anesthesia and Perioperative Care, University of California, San Francisco, San Francisco, CA 94110, USA.
James MarksDepartment of Anesthesia and Perioperative Care, University of California, San Francisco, San Francisco, CA 94110, USA.
Yifan ChengDepartment of Biochemistry and Biophysics, University of California, San Francisco, San Francisco, CA 94158, USA.ORCID 0000-0001-9535-0369
Jody L BaronDepartment of Medicine and Liver Center, University of California, San Francisco, San Francisco, CA 94143, USA.ORCID 0000-0003-2799-9099
Stephen L NishimuraDepartment of Pathology, University of California, San Francisco, San Francisco, CA 94110, USA. stephen.nishimura@ucsf.edu.ORCID 0000-0003-2312-4113
University of California, San Francisco · USHoward Hughes Medical Institute · US

Funding

UCSF Liver Core CenterP30DK026743 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Holger Willenbring · 1986 to 2026
$30.7M
UC BRAID Center for Accelerated Innovation COVID-19 diagnostic project developmentU54HL119893 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PALAZZOLO, MICHAEL J · 2013 to 2020
$18.3M
MOLECULAR AND CELLULAR IMMUNOLOGYT32AI007334 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CYSTER, JASON G · 1988 to 2023
$11.0M
Structural mechanism of integrin-mediated TGF-b activationR01HL134183 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Yifan Cheng, Stephen L Nishimura · 2016 to 2026
$5.9M
Renewable antibodies to secreted proteins and single and multi-pass cell surfaceP41CA196276 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CRAIK, CHARLES SCOTT · 2014 to 2018
$5.8M
Integrating targeted and immunotherapy to treat genetically heterogeneous cancersU01CA217864 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BALMAIN, ALLAN, KRUMMEL, MATTHEW F · 2017 to 2021
$5.1M
The Tumor Microenvironment Niche of Type I conventional Dendritic CellsR01CA197363 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MATTHEW F KRUMMEL · 2017 to 2026
$4.5M
Conformational regulation of TGF-β activation by integrin αvβ6R01HL165175 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Yifan Cheng, Stephen L Nishimura · 2023 to 2026
$3.2M
Role of genetic variation in TGF-beta overactivation in COPDR01HL113032 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NISHIMURA, STEPHEN L · 2012 to 2015
$2.1M
Identifying and modulating therapeutic targets in a model of hepatitis BR01DK093646 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BARON, JODY L · 2012 to 2016
$1.7M
Identifying a role for commensal bacteria on the liver immune priming environmentK01DK099405 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PUBLICOVER, JEAN · 2013 to 2017
$715k
Linux cluster for near atomic resolution single particle cryo-EMS10OD020054 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHENG, YIFAN · 2015 to 2015
$456k
Howard Hughes Medical InstituteNCI NIH HHS P41 CA196276NCI NIH HHS R01 CA197363NCI NIH HHS U01 CA217864NHLBI NIH HHS R01 HL113032NHLBI NIH HHS R01 HL134183NHLBI NIH HHS R01 HL165175NHLBI NIH HHS U54 HL119893NIAID NIH HHS T32 AI007334NIDDK NIH HHS F31 DK112607NIDDK NIH HHS K01 DK099405NIDDK NIH HHS P30 DK026743NIDDK NIH HHS R01 DK093646NIH HHS S10 OD020054
6 · The paper itself

Abstract

Regulatory T cells (T

Indexed as

Tumor EscapeAnimalsBiomarkersCell Line, TumorComputational BiologyCytokinesDisease Models, AnimalDisease SusceptibilityGene Expression ProfilingHumansIntegrinsMiceModels, BiologicalNeoplasmsT-Lymphocytes, RegulatoryT-Lymphocyte SubsetsBiomarkersCytokinesintegrin alphavbeta8Integrins

Identifiers

PMID33771888
PMCPMC8425767
OpenAlexW3138614448

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.