Evidence map›Paper›PMID 33768644›Full record

ArticleThe Plant journal : for cell and molecular biology2021

The chemical compound 'Heatin' stimulates hypocotyl elongation and interferes with the Arabidopsis NIT1-subfamily of nitrilases.

Lennard van der Woude, Markus Piotrowski, Gruson Klaasse, Judith K Paulus, Daniel Krahn, Sabrina Ninck, Farnusch Kaschani, Markus Kaiser, Ondřej Novák, Karin Ljung and 9 more

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In one paragraph

Article in The Plant journal : for cell and molecular biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
6.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 7 institutions in 5 countries.

Lennard van der WoudeMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, Padualaan 8, Utrecht, 3584 CH, the Netherlands.
Markus PiotrowskiDepartment of Molecular Genetics and Physiology of Plants, Faculty of Biology and Biotechnology, Universitätsstraße 150, Bochum, 44801, Germany.
Gruson KlaasseDepartment of Chemical Biology & Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, University Utrecht, Universiteitsweg 99, Utrecht, 3584 CG, the Netherlands.
Judith K PaulusPlant Chemetics Laboratory, Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB, UK.
Daniel KrahnPlant Chemetics Laboratory, Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB, UK.
Sabrina NinckChemische Biologie, Zentrum für Medizinische Biotechnologie, Fakultät für Biologie, Universität Duisburg-Essen, Universitätsstr. 2, Essen, 45117, Germany.
Farnusch KaschaniChemische Biologie, Zentrum für Medizinische Biotechnologie, Fakultät für Biologie, Universität Duisburg-Essen, Universitätsstr. 2, Essen, 45117, Germany.
Markus KaiserChemische Biologie, Zentrum für Medizinische Biotechnologie, Fakultät für Biologie, Universität Duisburg-Essen, Universitätsstr. 2, Essen, 45117, Germany.
Ondřej NovákUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umea, SE-901 83, Sweden.
Karin LjungUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umea, SE-901 83, Sweden.
Suzanne BulderBejo Zaden B.V., Trambaan 1, Warmenhuizen, 1749 CZ, the Netherlands.
Marcel van VerkPlant-Microbe Interactions, Institute of Environmental Biology, Utrecht University, Padualaan 8, Utrecht, 3584 CH, the Netherlands.
Basten L SnoekTheoretical Biology and Bioinformatics, Institute of Biodynamics and Biocomplexity, Utrecht University, Padualaan 8, Utrecht, 3584 CH, the Netherlands.
Martijn FiersBioscience, Wageningen University and Research, Droevendaalsesteeg 1, Wageningen, 6708 PB, the Netherlands.
Nathaniel I MartinDepartment of Chemical Biology & Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, University Utrecht, Universiteitsweg 99, Utrecht, 3584 CG, the Netherlands.
Renier A L van der HoornPlant Chemetics Laboratory, Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB, UK.
Stéphanie RobertUmeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umea, SE-901 83, Sweden.
Sjef SmeekensMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, Padualaan 8, Utrecht, 3584 CH, the Netherlands.
Martijn van ZantenMolecular Plant Physiology, Institute of Environmental Biology, Utrecht University, Padualaan 8, Utrecht, 3584 CH, the Netherlands.ORCID 0000-0002-2810-7374
Utrecht University · NLSwedish University of Agricultural Sciences · SEUniversity of Duisburg-Essen · DEUniversity of Oxford · GBBejo Zaden (Netherlands) · NLLeiden University · NLWageningen University & Research · NL

Funding

BBSRC BB/R017913/1BBSRC BB/S003193/1Deutsche Forschungsgemeinschaft (DFG) INST 20876/127-1H2020 European Research Council 258413H2020 European Research Council 616449Knut and Alice Wallenberg Foundation (KAW)Ministry of Education Youth and Sports of the Czech Republic CZ.02.1.01/0.0/0.0/16_019/0000827Netherlands Organisation for Scientific research (NWO) 831.13.002Swedish Foundation for Strategic ResearchSwedish Metabolomics Centre for the Use of InstrumentationSwedish Research Council
6 · The paper itself

Abstract

Temperature passively affects biological processes involved in plant growth. Therefore, it is challenging to study the dedicated temperature signalling pathways that orchestrate thermomorphogenesis, a suite of elongation growth-based adaptations that enhance leaf-cooling capacity. We screened a chemical library for compounds that restored hypocotyl elongation in the pif4-2-deficient mutant background at warm temperature conditions in Arabidopsis thaliana to identify modulators of thermomorphogenesis. The small aromatic compound 'Heatin', containing 1-iminomethyl-2-naphthol as a pharmacophore, was selected as an enhancer of elongation growth. We show that ARABIDOPSIS ALDEHYDE OXIDASES redundantly contribute to Heatin-mediated hypocotyl elongation. Following a chemical proteomics approach, the members of the NITRILASE1-subfamily of auxin biosynthesis enzymes were identified among the molecular targets of Heatin. Our data reveal that nitrilases are involved in promotion of hypocotyl elongation in response to high temperature and Heatin-mediated hypocotyl elongation requires the NITRILASE1-subfamily members, NIT1 and NIT2. Heatin inhibits NIT1-subfamily enzymatic activity in vitro and the application of Heatin accordingly results in the accumulation of NIT1-subfamily substrate indole-3-acetonitrile in vivo. However, levels of the NIT1-subfamily product, bioactive auxin (indole-3-acetic acid), were also significantly increased. It is likely that the stimulation of hypocotyl elongation by Heatin might be independent of its observed interaction with NITRILASE1-subfamily members. However, nitrilases may contribute to the Heatin response by stimulating indole-3-acetic acid biosynthesis in an indirect way. Heatin and its functional analogues present novel chemical entities for studying auxin biology.

Indexed as

Aldehyde OxidaseAminohydrolasesApomorphineArabidopsisArabidopsis ProteinsEnzyme InhibitorsGene Expression Regulation, PlantHerbicidesHypocotylIndoleacetic AcidsMolecular StructurePicloramStructure-Activity RelationshipTranscriptome10,11-dihydroxy-N-n-propylnorapomorphineAAO1 protein, ArabidopsisAldehyde OxidaseAminohydrolasesApomorphineArabidopsis ProteinsEnzyme InhibitorsHerbicidesIndoleacetic AcidsnitrilasePicloram1-iminomethyl-2-naphtholaldehyde oxidaseArabidopsischemical geneticsHeatinIANindole-3-acetonitrileNIT1-subfamilynitrilasesPIF4thermomorphogenesis

Identifiers

PMID33768644
PMCPMC8360157
OpenAlexW3139264542

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.