Evidence map›Paper›PMID 33767572›Full record

ArticleIJCAI : proceedings of the conference2019

DDL: Deep Dictionary Learning for Predictive Phenotyping.

Tianfan Fu, Trong Nghia Hoang, Cao Xiao, Jimeng Sun

Open access · goldAbstract read
In one paragraph

Article in IJCAI : proceedings of the conference, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. TACCO: Task-guided Co-clustering of Clinical Concepts and Patient Visits for Disease Subtyping based on EHR Data.KDD : proceedings. International Conference on Knowledge Discovery & Data Mining · 2024
    Article
  3. Article
  4. Article
  5. Article
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  7. Article
  8. Hierarchical Information Criterion for Variable Abstraction.Proceedings of machine learning research · 2021
    Article
  9. TASTE: Temporal and Static Tensor Factorization for Phenotyping Electronic Health Records.Proceedings of the ACM Conference on Health, Inference, and Learning · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Tianfan FuDepartment of Computational Science and Engineering, Georgia Institute of Technology.
Trong Nghia HoangMIT-IBM Watson AI Lab, IBM Research.
Cao XiaoAnalytics Center of Excellence, IQVIA.
Jimeng SunDepartment of Computational Science and Engineering, Georgia Institute of Technology.
Georgia Institute of Technology · USIBM (United States) · USIQVIA (United Kingdom) · GB

Funding

Reducing Disparities among Kidney Transplant RecipientsR01MD011682 · NIMHD · EMORY UNIVERSITY · PI ADAMS, ANDREW B, PATZER, RACHEL E · 2017 to 2021
$2.4M
Interpretable Deep Learning Model for Longitudinal Electronic Health Records and Applications to Heart Failure PredictionR56HL138415 · NHLBI · GEORGIA INSTITUTE OF TECHNOLOGY · PI ZHANG, CHAO · 2017 to 2017
$756k
NHLBI NIH HHS R56 HL138415NIMHD NIH HHS R01 MD011682
6 · The paper itself

Abstract

Predictive phenotyping is about accurately predicting what phenotypes will occur in the next clinical visit based on longitudinal Electronic Health Record (EHR) data. While deep learning (DL) models have recently demonstrated strong performance in predictive phenotyping, they require access to a large amount of labeled data, which are expensive to acquire. To address this label-insufficient challenge, we propose a deep dictionary learning framework (DDL) for phenotyping, which utilizes unlabeled data as a complementary source of information to generate a better, more succinct data representation. Our empirical evaluations on multiple EHR datasets demonstrated that DDL outperforms the existing predictive phenotyping methods on a wide variety of clinical tasks that require patient phenotyping. The results also show that unlabeled data can be used to generate better data representation that helps improve DDL's phenotyping performance over existing methods that only uses labeled data.

Identifiers

PMID33767572
PMCPMC7990269
OpenAlexW2965828587

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.