Evidence map›Paper›PMID 33767358›Full record

ArticleCommunications biology2021

Structure analysis suggests Ess1 isomerizes the carboxy-terminal domain of RNA polymerase II via a bivalent anchoring mechanism.

Kevin E W Namitz, Tongyin Zheng, Ashley J Canning, Nilda L Alicea-Velazquez, Carlos A Castañeda, Michael S Cosgrove, Steven D Hanes

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Kevin E W Namitz *Department of Biochemistry and Molecular Biology, SUNY-Upstate Medical University, Syracuse, NY, USA.ORCID 0000-0003-4434-1475
Tongyin Zheng *Departments of Biology and Chemistry, Syracuse University, Syracuse, NY, USA.
Ashley J CanningDepartment of Biochemistry and Molecular Biology, SUNY-Upstate Medical University, Syracuse, NY, USA.
Nilda L Alicea-VelazquezDepartment of Biochemistry and Molecular Biology, SUNY-Upstate Medical University, Syracuse, NY, USA.
Carlos A CastañedaDepartments of Biology and Chemistry, Syracuse University, Syracuse, NY, USA. cacastan@syr.edu.ORCID 0000-0001-9634-0867
Michael S CosgroveDepartment of Biochemistry and Molecular Biology, SUNY-Upstate Medical University, Syracuse, NY, USA. cosgrovm@upstate.edu.
Steven D HanesDepartment of Biochemistry and Molecular Biology, SUNY-Upstate Medical University, Syracuse, NY, USA. haness@upstate.edu.ORCID 0000-0002-9069-6878
SUNY Upstate Medical University · USSyracuse University · USCentral Connecticut State University · USPennsylvania State University · US

Funding

Molecular Mechanisms for the Assembly and Regulation of the MLL1 Core ComplexR01CA140522 · NCI · UPSTATE MEDICAL UNIVERSITY · PI COSGROVE, MICHAEL S. · 2010 to 2019
$3.6M
A 800 MHz Nuclear Magnetic Resonance Spectrometer in Support of Life Science ReseS10OD012254 · OD · UPSTATE MEDICAL UNIVERSITY · PI WILKENS, STEPHAN · 2013 to 2013
$2.0M
Regulation of RNA Polymerase II by the Ess1 Prolyl IsomeraseR01GM123985 · NIGMS · UPSTATE MEDICAL UNIVERSITY · PI HANES, STEVEN D. · 2018 to 2021
$1.3M
High performance Orbitrap Fusion Lumos mass spectrometer for proteomics and metabolomic researchS10OD023617 · OD · UPSTATE MEDICAL UNIVERSITY · PI KNUTSON, BRUCE ALAN · 2018 to 2018
$1.1M
NCI NIH HHS R01 CA140522NIGMS NIH HHS R01 GM123985NIH HHS S10 OD012254NIH HHS S10 OD023617
6 · The paper itself

Abstract

Accurate gene transcription in eukaryotes depends on isomerization of serine-proline bonds within the carboxy-terminal domain (CTD) of RNA polymerase II. Isomerization is part of the "CTD code" that regulates recruitment of proteins required for transcription and co-transcriptional RNA processing. Saccharomyces cerevisiae Ess1 and its human ortholog, Pin1, are prolyl isomerases that engage the long heptad repeat (YSPTSPS)

Indexed as

IsomerismNIMA-Interacting Peptidylprolyl IsomeraseRNA Polymerase IISaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsESS1 protein, S cerevisiaeNIMA-Interacting Peptidylprolyl IsomeraseRNA Polymerase IISaccharomyces cerevisiae Proteins

Identifiers

PMID33767358
PMCPMC7994582
OpenAlexW3139340948

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.