Evidence map›Paper›PMID 33767218›Full record

Observational studyScientific reports2021

An observational study of anaerobic bacteria in cystic fibrosis lung using culture dependant and independent approaches.

Claudie Lamoureux, Charles-Antoine Guilloux, Clémence Beauruelle, Stéphanie Gouriou, Sophie Ramel, Anne Dirou, Jean Le Bihan, Krista Revert, Thomas Ropars, Rosyne Lagrafeuille and 4 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 21 citations in OpenAlex.

  1. Journal of bacteriology · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Functional CFTR may be required for Prevotella melaninogenica regulation of epithelial cell defense against Staphylococcus aureus.Journal of cystic fibrosis : official journal of the European Cystic Fibrosis Society · 2026
    Article
  7. Article
  8. iScience · 2025
    Article
  9. Review
  10. Genomic diversity inMicrobial genomics · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Microorganisms · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Claudie LamoureuxINSERM, EFS, Univ Brest, UMR 1078, GGB, 29200, Brest, France.
Charles-Antoine GuillouxINSERM, EFS, Univ Brest, UMR 1078, GGB, 29200, Brest, France.
Clémence BeauruelleINSERM, EFS, Univ Brest, UMR 1078, GGB, 29200, Brest, France.
Stéphanie GouriouINSERM, EFS, Univ Brest, UMR 1078, GGB, 29200, Brest, France.
Sophie RamelCystic Fibrosis Center of Roscoff, Fondation Ildys, Roscoff, France.
Anne DirouCystic Fibrosis Center of Roscoff, Fondation Ildys, Roscoff, France.
Jean Le BihanCystic Fibrosis Center of Roscoff, Fondation Ildys, Roscoff, France.
Krista RevertCystic Fibrosis Center of Roscoff, Fondation Ildys, Roscoff, France.
Thomas RoparsCystic Fibrosis Center of Roscoff, Fondation Ildys, Roscoff, France.
Rosyne LagrafeuilleINSERM, EFS, Univ Brest, UMR 1078, GGB, 29200, Brest, France.
Sophie ValletINSERM, EFS, Univ Brest, UMR 1078, GGB, 29200, Brest, France.
Rozenn Le BerreINSERM, EFS, Univ Brest, UMR 1078, GGB, 29200, Brest, France.
Emmanuel NowakINSERM CIC 1412, Brest University Hospital, Brest, France.
Geneviève Héry-ArnaudINSERM, EFS, Univ Brest, UMR 1078, GGB, 29200, Brest, France. hery@univ-brest.fr.
Station Biologique de Roscoff · FRCentre Hospitalier Régional Universitaire de Brest · FRGénétique, Génomique Fonctionnelle et Biotechnologies · FRInserm · FRUniversité de Bretagne Occidentale · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Strict anaerobes are undeniably important residents of the cystic fibrosis (CF) lung but are still unknowns. The main objectives of this study were to describe anaerobic bacteria diversity in CF airway microbiota and to evaluate the association with lung function. An observational study was conducted during eight months. A hundred and one patients were enrolled in the study, and 150 sputum samples were collected using a sterile sample kit designed to preserve anaerobic conditions. An extended-culture approach on 112 sputa and a molecular approach (quantitative PCR targeting three of the main anaerobic genera in CF lung: Prevotella, Veillonella, and Fusobacterium) on 141 sputa were developed. On culture, 91.1% of sputa were positive for at least one anaerobic bacterial species, with an average of six anaerobic species detected per sputum. Thirty-one anaerobic genera and 69 species were found, which is the largest anaerobe diversity ever reported in CF lungs. Better lung function (defined as Forced Expiratory Volume in one second > 70%) was significantly associated with higher quantification of Veillonella. These results raise the question of the potential impact of anaerobes on lung function.

Indexed as

AdolescentAdultBacteria, AnaerobicCohort StudiesCystic FibrosisFemaleForced Expiratory VolumeHumansLungMaleRespiratory Function TestsSputumYoung Adult

Identifiers

PMID33767218
PMCPMC7994387
OpenAlexW3138422044

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.