Evidence map›Paper›PMID 33766816›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2021

The Landscape of Alterations in DNA Damage Response Pathways in Colorectal Cancer.

Hiroyuki Arai, Andrew Elliott, Joanne Xiu, Jingyuan Wang, Francesca Battaglin, Natsuko Kawanishi, Shivani Soni, Wu Zhang, Joshua Millstein, Davendra Sohal and 15 more

Open access · bronzeAbstract read
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 40 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 13 institutions in 2 countries.

Hiroyuki AraiDivision of Medical Oncology, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California.
Andrew ElliottClinical and Translational Research, Medical Affairs, Caris Life Sciences, Phoenix, Arizona.
Joanne XiuClinical and Translational Research, Medical Affairs, Caris Life Sciences, Phoenix, Arizona.
Jingyuan WangDivision of Medical Oncology, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California.
Francesca BattaglinDivision of Medical Oncology, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California.
Natsuko KawanishiDivision of Medical Oncology, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California.ORCID 0000-0001-9799-9188
Shivani SoniDivision of Medical Oncology, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California.
Wu ZhangDivision of Medical Oncology, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California.
Joshua MillsteinDepartment of Preventive Medicine, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California.
Davendra SohalDivision of Hematology/Oncology, University of Cincinnati, Cincinnati, Ohio.
Richard M GoldbergWest Virginia University Cancer Institute, Morgantown, West Virginia.ORCID 0000-0003-0308-8223
Michael J HallDepartment of Clinical Genetics, Fox Chase Cancer Center, Philadelphia, Pennsylvania.
Aaron J ScottDepartment of Medicine, University of Arizona Cancer Center, Tucson, Arizona.
Moh'd KhushmanMedical Oncology, Mitchell Cancer Institute, The University of South Alabama, Mobile, Alabama.ORCID 0000-0002-3095-5073
Jimmy J HwangDepartment of Solid Tumor Oncology, GI Medical Oncology, Levine Cancer Institute, Charlotte, North Carolina.
Emil LouDivision of Hematology, Oncology and Transplantation, University of Minnesota, Minneapolis, Minnesota.ORCID 0000-0002-1607-1386
Benjamin A WeinbergRuesch Center for the Cure of Gastrointestinal Cancers, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC.ORCID 0000-0002-0408-4817
John L MarshallRuesch Center for the Cure of Gastrointestinal Cancers, Lombardi Comprehensive Cancer Center, Georgetown University, Washington, DC.ORCID 0000-0002-3449-2344
Albert C LockhartDepartment of Medicine, Division of Oncology, University of Miami, Miller School of Medicine, Miami, Florida.
Phillip StaffordDepartment of Bioinformatics, Caris Life Sciences, Phoenix, Arizona.
Jian ZhangDepartment of Bioinformatics, Caris Life Sciences, Phoenix, Arizona.
Roberto MorettoUnit of Medical Oncology 2, Azienda Ospedaliero-Universitaria Pisana, Pisa, Italy.
Chiara CremoliniDepartment of Translational Research and New Technologies in Medicine and Surgery, University of Pisa, Pisa, Italy.
W Michael KornMedical Affairs, Caris Life Sciences, Phoenix, Arizona.ORCID 0000-0002-0124-6841
Heinz-Josef LenzDivision of Medical Oncology, Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, California. lenz@usc.edu.ORCID 0000-0003-2178-9568
University of Southern California · USCaris Life Sciences (United States) · USGeorgetown University · USAzienda Ospedaliera Universitaria Pisana · ITFox Chase Cancer Center · USLevine Cancer Institute · USUniversity of Arizona · USUniversity of Cincinnati · USUniversity of Miami · USUniversity of Minnesota · USUniversity of Pisa · ITUSA Mitchell Cancer Institute · USWest Virginia University · US

Funding

USC/NORRIS COMPREHENSIVE CANCER CENTER (CORE) SUPPORTP30CA014089 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MYLES G COCKBURN · 1985 to 2026
$181.4M
NCI NIH HHS P30 CA014089
6 · The paper itself

Abstract

purposeDefective DNA damage response (DDR) is a hallmark of cancer leading to genomic instability and is associated with chemosensitivity. Although the mismatch repair system has been extensively studied, the clinical implications of other mechanisms associated with DDR alterations in patients with colorectal cancer remain unclear. This study aimed to understand DDR pathways alterations and their association with common clinical features in patients with colorectal cancer. EXPERIMENTAL

designNext-generation sequencing and whole-transcriptome sequencing were conducted using formalin-fixed paraffin-embedded samples submitted to a commercial Clinical Laboratory Improvement Amendments-certified laboratory. Samples with pathogenic or presumed pathogenic mutations in 29 specific DDR-related genes were considered as DDR-mutant (DDR-MT) and the remaining samples as DDR-wild type (DDR-WT).

resultsOf 9,321 patients with colorectal cancer, 1,290 (13.8%) were DDR-MT. The frequency of DDR-MT was significantly higher in microsatellite instability-high (MSI-H) cases than in microsatellite stable cases (76.4% vs. 9.5%). The DDR-MT genotype was higher in the right-sided,

conclusionsWe characterized a distinct subgroup of patients with colorectal cancer with tumors harboring mutations in the DDR-related genes. These patients more commonly had MSI-H tumors and exhibited an activated immune signature regardless of their tumor's MSI status. These findings warrant further investigations to develop personalized treatment strategies in this significant subgroup of patients with colorectal cancer.

Indexed as

Colorectal NeoplasmsDNA DamageDrug Resistance, NeoplasmFemaleGenomic InstabilityHumansMaleMicrosatellite InstabilityMutation

Identifiers

PMID33766816
PMCPMC12047448
OpenAlexW3136758648

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.