Evidence map›Paper›PMID 33763824›Full record

ArticleMolecular biotechnology2021

Biosynthesis of the Tricyclic Aromatic Type II Polyketide Rishirilide: New Potential Third Ring Oxygenation after Three Cyclization Steps.

Ahmad Alali, Lin Zhang, Jianyu Li, Chijian Zuo, Dimah Wassouf, Xiaohui Yan, Philipp Schwarzer, Stefan Günther, Oliver Einsle, Andreas Bechthold

Open access · hybridAbstract read
In one paragraph

Article in Molecular biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Ahmad AlaliInstitute of Pharmaceutical Biology and Biotechnology, Albert-Ludwigs-Universität, Stefan-Meier-Straße 19, 79104, Freiburg, Germany.
Lin ZhangInstitute of Biochemistry, Albert-Ludwigs-Universität, Albertstr 21, 79104, Freiburg, Germany.
Jianyu LiInstitute of Pharmaceutical Bioinformatics, Albert-Ludwigs-Universität, Hermann-Herder-Str 9, 79104, Freiburg, Germany.
Chijian ZuoInstitute of Pharmaceutical Biology and Biotechnology, Albert-Ludwigs-Universität, Stefan-Meier-Straße 19, 79104, Freiburg, Germany.
Dimah WassoufInstitute of Pharmaceutical Biology and Biotechnology, Albert-Ludwigs-Universität, Stefan-Meier-Straße 19, 79104, Freiburg, Germany.
Xiaohui YanInstitute of Pharmaceutical Biology and Biotechnology, Albert-Ludwigs-Universität, Stefan-Meier-Straße 19, 79104, Freiburg, Germany.
Philipp SchwarzerInstitute of Pharmaceutical Biology and Biotechnology, Albert-Ludwigs-Universität, Stefan-Meier-Straße 19, 79104, Freiburg, Germany.
Stefan GüntherInstitute of Pharmaceutical Bioinformatics, Albert-Ludwigs-Universität, Hermann-Herder-Str 9, 79104, Freiburg, Germany.
Oliver EinsleInstitute of Biochemistry, Albert-Ludwigs-Universität, Albertstr 21, 79104, Freiburg, Germany.
Andreas BechtholdInstitute of Pharmaceutical Biology and Biotechnology, Albert-Ludwigs-Universität, Stefan-Meier-Straße 19, 79104, Freiburg, Germany. andreas.bechthold@pharmazie.uni-freiburg.de.ORCID http://orcid.org/0000-0003-3594-6851
University of Freiburg · DE

Funding

Deutsche Forschungsgemeinschaft RTG 1976
6 · The paper itself

Abstract

Rishirilides are a group of PKS II secondary metabolites produced by Streptomyces bottropensis Gö C4/4. Biosynthetic studies in the past have elucidated early and late steps of rishirilide biosynthesis. This work is aiming to solve the remaining steps in the rishirilide biosynthesis. Inactivation of the cyclase gene rslC3 in Streptomyces bottropensis resulted in an interruption of rishirilide production. Instead, accumulation of the tricyclic aromatic galvaquinones was observed. Similar results were observed after deletion of rslO4. Closer inspection into RslO4 crystal structure in addition to site-directed mutagenesis and molecular dynamic simulations revealed that RslO4 might be responsible for quinone formation on the third ring. The RslO1 three-dimensional structure shows a high similarity to FMN-dependent luciferase-like monooxygenases such as the epoxy-forming MsnO8 which acts with the flavin reductase MsnO3 in mensacarcin biosynthesis in the same strain. The high sequence similarity between RslO2 and MsnO3 suggests that RslO2 provides RslO1 with reduced FMN to form an epoxide that serves as substrate for RslO5.

Indexed as

AnthracenesBacterial ProteinsCyclizationMultienzyme ComplexesMultigene FamilyMutagenesis, Site-DirectedPolyketidesPolyketide SynthasesStreptomycesAnthracenesBacterial ProteinsmensacarcinMultienzyme ComplexesPolyketidesPolyketide Synthasesrishirilide ACRISPR-Cas9CyclizationEpoxidationOxygenationRishirilide

Identifiers

PMID33763824
PMCPMC8093152
OpenAlexW3138526902

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.