Evidence map›Paper›PMID 33760861›Full record

ArticlePloS one2021

Improved detection of air trapping on expiratory computed tomography using deep learning.

Sundaresh Ram, Benjamin A Hoff, Alexander J Bell, Stefanie Galban, Aleksa B Fortuna, Oliver Weinheimer, Mark O Wielpütz, Terry E Robinson, Beverley Newman, Dharshan Vummidi and 6 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Radiomics and Artificial Intelligence in Pulmonary Fibrosis.Journal of imaging informatics in medicine · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. CT-based Machine Learning for Donor Lung Screening Prior to Transplantation.medRxiv : the preprint server for health sciences · 2023
    Article
  10. Artificial Intelligence Techniques to Predict the Airway Disorders Illness: A Systematic Review.Archives of computational methods in engineering : state of the art reviews · 2023
    Review
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 5 institutions in 2 countries.

Sundaresh RamDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0003-1828-9722
Benjamin A HoffDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.
Alexander J BellDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.
Stefanie GalbanDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.
Aleksa B FortunaDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.
Oliver WeinheimerDepartment of Diagnostic and Interventional Radiology, University Hospital of Heidelberg, Heidelberg, Germany.
Mark O WielpützDepartment of Diagnostic and Interventional Radiology, University Hospital of Heidelberg, Heidelberg, Germany.
Terry E RobinsonDepartment of Pediatrics, Center of Excellence in Pulmonary Biology, Stanford University School of Medicine, Stanford, California, United States of America.
Beverley NewmanDepartment of Pediatric Radiology, Lucile Packard Children's Hospital at Stanford, Stanford, California, United States of America.
Dharshan VummidiDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.
Aamer ChughtaiDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.
Ella A KazerooniDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.
Timothy D JohnsonDepartment of Biostatistics, University of Michigan, School of Public Health, Ann Arbor, Michigan, United States of America.
MeiLan K HanDepartment of Internal Medicine, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.
Charles R HattDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0001-7097-5434
Craig J GalbanDepartment of Radiology, Michigan Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0001-5596-7487
Michigan United · USHeidelberg University · DELucile Packard Children's Hospital · USStanford University · USUniversity of Michigan · US

Funding

Prediction of COPD Progression by PRMR01HL150023 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GALBAN, CRAIG J, HAN, MEILAN K · 2020 to 2023
$2.8M
An Early Imaging Marker of EmphysemaR01HL139690 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GALBAN, CRAIG J · 2019 to 2022
$1.9M
Commercialization of a CT-based Technique for BOS AssessmentR44HL140894 · NHLBI · IMBIO, LLC · PI GALBAN, CRAIG J, LUDWIG, KAI DAVID · 2018 to 2021
$1.7M
Defining Pathways in COPD Patient Oriented ResearchK24HL138188 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MeiLan K Han · 2017 to 2026
$1.2M
Off-the-Shelf Patch for Repairing Tracheal StenosisR43HL140890 · NHLBI · NANOFIBER SOLUTIONS, LLC · PI JOHNSON, JED KIZER · 2018 to 2018
$225k
NHLBI NIH HHS K24 HL138188NHLBI NIH HHS R01 HL139690NHLBI NIH HHS R01 HL150023NHLBI NIH HHS R43 HL140890NHLBI NIH HHS R44 HL140894
6 · The paper itself

Abstract

backgroundRadiologic evidence of air trapping (AT) on expiratory computed tomography (CT) scans is associated with early pulmonary dysfunction in patients with cystic fibrosis (CF). However, standard techniques for quantitative assessment of AT are highly variable, resulting in limited efficacy for monitoring disease progression.

objectiveTo investigate the effectiveness of a convolutional neural network (CNN) model for quantifying and monitoring AT, and to compare it with other quantitative AT measures obtained from threshold-based techniques. MATERIALS AND

methodsPaired volumetric whole lung inspiratory and expiratory CT scans were obtained at four time points (0, 3, 12 and 24 months) on 36 subjects with mild CF lung disease. A densely connected CNN (DN) was trained using AT segmentation maps generated from a personalized threshold-based method (PTM). Quantitative AT (QAT) values, presented as the relative volume of AT over the lungs, from the DN approach were compared to QAT values from the PTM method. Radiographic assessment, spirometric measures, and clinical scores were correlated to the DN QAT values using a linear mixed effects model.

resultsQAT values from the DN were found to increase from 8.65% ± 1.38% to 21.38% ± 1.82%, respectively, over a two-year period. Comparison of CNN model results to intensity-based measures demonstrated a systematic drop in the Dice coefficient over time (decreased from 0.86 ± 0.03 to 0.45 ± 0.04). The trends observed in DN QAT values were consistent with clinical scores for AT, bronchiectasis, and mucus plugging. In addition, the DN approach was found to be less susceptible to variations in expiratory deflation levels than the threshold-based approach.

conclusionThe CNN model effectively delineated AT on expiratory CT scans, which provides an automated and objective approach for assessing and monitoring AT in CF patients.

Indexed as

AirDeep LearningTomography, X-Ray ComputedChildExhalationFemaleHumansMaleNeural Networks, ComputerRegression AnalysisRespiratory Function Tests

Identifiers

PMID33760861
PMCPMC7990199
OpenAlexW3136242631

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.