Evidence map›Paper›PMID 33760340›Full record

ArticleEnvironmental microbiology2021

Subzero, saline incubations of Colwellia psychrerythraea reveal strategies and biomarkers for sustained life in extreme icy environments.

Miranda C Mudge, Brook L Nunn, Erin Firth, Marcela Ewert, Kianna Hales, William E Fondrie, William S Noble, Jonathan Toner, Bonnie Light, Karen A Junge

Open access · greenAbstract read
In one paragraph

Article in Environmental microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 21 citations in OpenAlex.

  1. Halotolerant bacteria from mangrove and restinga ecosystems in Camocim, Brazil: astrobiological relevance and biotechnological potential.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Miranda C MudgeDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.ORCID 0000-0003-3769-5937
Brook L NunnDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.ORCID 0000-0002-7361-4359
Erin FirthApplied Physics Lab, Polar Science Center, University of Washington, Seattle, WA, USA.
Marcela EwertApplied Physics Lab, Polar Science Center, University of Washington, Seattle, WA, USA.
Kianna HalesDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
William E FondrieDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
William S NobleDepartment of Genome Sciences, University of Washington, Seattle, WA, USA.
Jonathan TonerDepartment of Earth and Space Sciences, University of Washington, Seattle, WA, USA.
Bonnie LightApplied Physics Lab, Polar Science Center, University of Washington, Seattle, WA, USA.
Karen A JungeApplied Physics Lab, Polar Science Center, University of Washington, Seattle, WA, USA.
University of Washington · USNASA Astrobiology Institute · US

Funding

INTERDISCIPLINARY TRAINING IN GENOMIC SCIENCEST32HG000035 · NHGRI · UNIVERSITY OF WASHINGTON · PI Bruce Colston Trapnell · 1995 to 2026
$24.2M
Optimization and joint modeling for peptide detection by tandem mass spectrometryR01GM121818 · NIGMS · UNIVERSITY OF WASHINGTON · PI NOBLE, WILLIAM STAFFORD · 2017 to 2020
$1.3M
NHGRI NIH HHS T32 HG000035NIGMS NIH HHS R01 GM121818Shared Services Center NASA 80NSSC18K1291
6 · The paper itself

Abstract

Colwellia psychrerythraea is a marine psychrophilic bacterium known for its remarkable ability to maintain activity during long-term exposure to extreme subzero temperatures and correspondingly high salinities in sea ice. These microorganisms must have adaptations to both high salinity and low temperature to survive, be metabolically active, or grow in the ice. Here, we report on an experimental design that allowed us to monitor culturability, cell abundance, activity and proteomic signatures of C. psychrerythraea strain 34H (Cp34H) in subzero brines and supercooled sea water through long-term incubations under eight conditions with varying subzero temperatures, salinities and nutrient additions. Shotgun proteomics found novel metabolic strategies used to maintain culturability in response to each independent experimental variable, particularly in pathways regulating carbon, nitrogen and fatty acid metabolism. Statistical analysis of abundances of proteins uniquely identified in isolated conditions provide metabolism-specific protein biosignatures indicative of growth or survival in either increased salinity, decreased temperature, or nutrient limitation. Additionally, to aid in the search for extant life on other icy worlds, analysis of detected short peptides in -10°C incubations after 4 months identified over 500 potential biosignatures that could indicate the presence of terrestrial-like cold-active or halophilic metabolisms on other icy worlds.

Indexed as

AlteromonadaceaeProteomicsBiomarkersCold TemperatureBiomarkers

Identifiers

PMID33760340
PMCPMC8475265
OpenAlexW3136946226

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.