Evidence map›Paper›PMID 33758186›Full record

ArticleNature communications2021

Translation error clusters induced by aminoglycoside antibiotics.

Ingo Wohlgemuth, Raffaella Garofalo, Ekaterina Samatova, Aybeg Nafiz Günenç, Christof Lenz, Henning Urlaub, Marina V Rodnina

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
4.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 80 citations in OpenAlex.

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  15. Article
  16. Antibiotic-Induced Bacterial Cell Death: A "Radical" Way of Dying?Current topics in microbiology and immunology · 2025
    Article
  17. Article
  18. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Ingo WohlgemuthDepartment of Physical Biochemistry, Max Planck Institute for Biophysical Chemistry, Goettingen, Germany. ingo.wohlgemuth@mpibpc.mpg.de.ORCID 0000-0001-9121-7675
Raffaella GarofaloDepartment of Physical Biochemistry, Max Planck Institute for Biophysical Chemistry, Goettingen, Germany.ORCID 0000-0002-3491-8368
Ekaterina SamatovaDepartment of Physical Biochemistry, Max Planck Institute for Biophysical Chemistry, Goettingen, Germany.
Aybeg Nafiz GünençDepartment of Physical Biochemistry, Max Planck Institute for Biophysical Chemistry, Goettingen, Germany.ORCID 0000-0002-4795-902X
Christof LenzBioanalytical Mass Spectrometry Group, Max Planck Institute for Biophysical Chemistry, Goettingen, Germany.ORCID 0000-0002-0946-8166
Henning UrlaubBioanalytical Mass Spectrometry Group, Max Planck Institute for Biophysical Chemistry, Goettingen, Germany. henning.urlaub@mpibpc.mpg.de.ORCID 0000-0003-1837-5233
Marina V RodninaDepartment of Physical Biochemistry, Max Planck Institute for Biophysical Chemistry, Goettingen, Germany. rodnina@mpibpc.mpg.de.ORCID 0000-0003-0105-3879
Max Planck Institute for Biophysical Chemistry · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aminoglycoside antibiotics target the ribosome and induce mistranslation, yet which translation errors induce bacterial cell death is unclear. The analysis of cellular proteins by quantitative mass spectrometry shows that bactericidal aminoglycosides induce not only single translation errors, but also clusters of errors in full-length proteins in vivo with as many as four amino acid substitutions in a row. The downstream errors in a cluster are up to 10,000-fold more frequent than the first error and independent of the intracellular aminoglycoside concentration. The prevalence, length, and composition of error clusters depends not only on the misreading propensity of a given aminoglycoside, but also on its ability to inhibit ribosome translocation along the mRNA. Error clusters constitute a distinct class of misreading events in vivo that may provide the predominant source of proteotoxic stress at low aminoglycoside concentration, which is particularly important for the autocatalytic uptake of the drugs.

Indexed as

AminoglycosidesAnti-Bacterial AgentsEscherichia coliMass SpectrometryMutation, MissenseNebramycinPeptide Elongation Factor TuPeptidesProtein BiosynthesisProtein Synthesis InhibitorsProteomeProteomicsRecombinant ProteinsRibosomesStreptomycinStress, PhysiologicalAminoglycosidesAnti-Bacterial AgentsapramycinNebramycinPeptide Elongation Factor TuPeptidesProtein Synthesis InhibitorsProteomeRecombinant ProteinsStreptomycin

Identifiers

PMID33758186
PMCPMC7987974
OpenAlexW3137383444

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.