Evidence map›Paper›PMID 33754467›Full record

ArticleEnvironmental microbiology2021

C4-dicarboxylates and l-aspartate utilization by Escherichia coli K-12 in the mouse intestine: l-aspartate as a major substrate for fumarate respiration and as a nitrogen source.

Christopher Schubert, Maria Winter, Andrea Ebert-Jung, Sylwia Kierszniowska, Kerstin Nagel-Wolfrum, Thorben Schramm, Hannes Link, Sebastian Winter, Gottfried Unden

Open access · hybridAbstract read
PubMed Publisher
In one paragraph

Article in Environmental microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 31 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Nutrition ofEcoSal Plus · 2024
    Review
  8. Aspartate aminotransferase ofMicrobiology (Reading, England) · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Asuc_0142 ofMicrobiology (Reading, England) · 2023
    Article
  15. Article
  16. Article
  17. CJournal of bacteriology · 2022
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Christopher Schubert *Institute for Molecular Physiology, Johannes Gutenberg-University Mainz, Mainz, 55099, Germany.ORCID 0000-0002-7921-1470
Maria Winter *Department of Microbiology, UT Southwestern Medical Center, Dallas, TX, 75287, USA.
Andrea Ebert-JungInstitute for Molecular Physiology, Johannes Gutenberg-University Mainz, Mainz, 55099, Germany.
Sylwia KierszniowskametaSysX, Potsdam-Golm, 14476, Germany.
Kerstin Nagel-WolfrumInstitute for Molecular Physiology, Johannes Gutenberg-University Mainz, Mainz, 55099, Germany.
Thorben SchrammMax Planck Institute for Terrestrial Microbiology, Karl-von-Frisch-Straße 10, Marburg, 35043, Germany.
Hannes LinkMax Planck Institute for Terrestrial Microbiology, Karl-von-Frisch-Straße 10, Marburg, 35043, Germany.
Sebastian WinterDepartment of Microbiology, UT Southwestern Medical Center, Dallas, TX, 75287, USA.ORCID 0000-0003-1532-9178
Gottfried UndenInstitute for Molecular Physiology, Johannes Gutenberg-University Mainz, Mainz, 55099, Germany.ORCID 0000-0003-4906-1835
Johannes Gutenberg University Mainz · DEMax Planck Institute for Terrestrial Microbiology · DESouthwestern Medical Center · USUniversity of Potsdam · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

C4-dicarboxylates, such as fumarate, l-malate and l-aspartate represent substrates for anaerobic growth of Escherichia coli by fumarate respiration. Here, we determined whether C4-dicarboxylate metabolism, as well as fumarate respiration, contribute to colonization of the mammalian intestinal tract. Metabolite profiling revealed that the murine small intestine contained high and low levels of l-aspartate and l-malate respectively, whereas fumarate was nearly absent. Under laboratory conditions, addition of C4-dicarboxylate at concentrations corresponding to the levels of the C4-dicarboxylates in the small intestine (2.6 mmol kg

Indexed as

Escherichia coli K12Escherichia coli ProteinsAnimalsAspartic AcidDicarboxylic AcidsDicarboxylic Acid TransportersDNA-Binding ProteinsEscherichia coliFumaratesGene Expression Regulation, BacterialIntestinesMiceNitrogenProtein KinasesRespirationTranscription FactorsAspartic AcidDcuR protein, E coliDcuS protein, E coliDicarboxylic AcidsDicarboxylic Acid TransportersDNA-Binding ProteinsEscherichia coli ProteinsFumaratesNitrogenProtein KinasesTranscription Factors

Identifiers

PMID33754467
OpenAlexW3138696887

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.