Evidence map›Paper›PMID 33750945›Full record

ArticlePLoS genetics2021

Critical role of the BAF chromatin remodeling complex during murine neural crest development.

Kathleen Wung Bi-Lin, Pratap Veerabrahma Seshachalam, Tran Tuoc, Anastassia Stoykova, Sujoy Ghosh, Manvendra K Singh

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

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  16. The Cardiac Neural Crest Cells in Heart Development and Congenital Heart Defects.Journal of cardiovascular development and disease · 2021
    Review
  17. Hippo-Yap Pathway Orchestrates Neural Crest Ontogenesis.Frontiers in cell and developmental biology · 2021
    Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Kathleen Wung Bi-LinProgram in Cardiovascular and Metabolic Disorders, Duke-NUS Medical School Singapore, Singapore.
Pratap Veerabrahma SeshachalamProgram in Cardiovascular and Metabolic Disorders, Duke-NUS Medical School Singapore, Singapore.ORCID 0000-0001-9211-2453
Tran TuocDepartment of Human Genetics, Ruhr University of Bochum, Bochum, Germany.
Anastassia StoykovaMax-Planck-Institute for Biophysical Chemistry, Goettingen, Germany.
Sujoy GhoshProgram in Cardiovascular and Metabolic Disorders, Duke-NUS Medical School Singapore, Singapore.ORCID 0000-0002-7601-165X
Manvendra K SinghProgram in Cardiovascular and Metabolic Disorders, Duke-NUS Medical School Singapore, Singapore.ORCID 0000-0002-2884-0074
Duke-NUS Medical School · SGMax Planck Institute for Biophysical Chemistry · DEUniversity of Göttingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The BAF complex plays an important role in the development of a wide range of tissues by modulating gene expression programs at the chromatin level. However, its role in neural crest development has remained unclear. To determine the role of the BAF complex, we deleted BAF155/BAF170, the core subunits required for the assembly, stability, and functions of the BAF complex in neural crest cells (NCCs). Neural crest-specific deletion of BAF155/BAF170 leads to embryonic lethality due to a wide range of developmental defects including craniofacial, pharyngeal arch artery, and OFT defects. RNAseq and transcription factor enrichment analysis revealed that the BAF complex modulates the expression of multiple signaling pathway genes including Hippo and Notch, essential for the migration, proliferation, and differentiation of the NCCs. Furthermore, we demonstrated that the BAF complex is essential for the Brg1-Yap-Tead-dependent transcription of target genes in NCCs. Together, our results demonstrate an important role of the BAF complex in modulating the gene regulatory network essential for neural crest development.

Indexed as

Chromatin Assembly and DisassemblyGene Expression Regulation, DevelopmentalAnimalsCell DifferentiationCell ProliferationDNA-Binding ProteinsEmbryonic DevelopmentGene DeletionGene Regulatory NetworksGenes, ReporterMiceMice, TransgenicNeural CrestNeurogenesisOrgan SpecificityTranscription FactorsDNA-Binding ProteinsSmarcc1 protein, mouseSmarcc2 protein, mouseTranscription Factors

Identifiers

PMID33750945
PMCPMC8016319
OpenAlexW3136228621

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.