Evidence map›Paper›PMID 33750464›Full record

ArticleClinical epigenetics2021

Clinical validation of a novel quantitative assay for the detection of MGMT methylation in glioblastoma patients.

Rocio Rosas-Alonso, Julian Colmenarejo-Fernandez, Olga Pernia, Carlos Rodriguez-Antolín, Isabel Esteban, Ismael Ghanem, Dario Sanchez-Cabrero, Itsaso Losantos-Garcia, Sara Palacios-Zambrano, Gema Moreno-Bueno and 3 more

Open access · goldAbstract readComparative Study
In one paragraph

Article in Clinical epigenetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 21 citations in OpenAlex.

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  7. The Significance ofInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Rocio Rosas-AlonsoEpigenetics Laboratory. INGEMM, Paseo La Castellana 261. Edificio Bloque Quirúrgico Planta -2. University Hospital La Paz, 28046, Madrid, Spain. rocio.rosas@salud.madrid.org.
Julian Colmenarejo-FernandezEpigenetics Laboratory. INGEMM, Paseo La Castellana 261. Edificio Bloque Quirúrgico Planta -2. University Hospital La Paz, 28046, Madrid, Spain.
Olga PerniaEpigenetics Laboratory. INGEMM, Paseo La Castellana 261. Edificio Bloque Quirúrgico Planta -2. University Hospital La Paz, 28046, Madrid, Spain.
Carlos Rodriguez-AntolínEpigenetics Laboratory. INGEMM, Paseo La Castellana 261. Edificio Bloque Quirúrgico Planta -2. University Hospital La Paz, 28046, Madrid, Spain.
Isabel EstebanExperimental Therapies and Novel Biomarkers in Cancer. IdiPAZ, Madrid, Spain.
Ismael GhanemMedical Oncology Department, La Paz University Hospital, Madrid, Spain.
Dario Sanchez-CabreroExperimental Therapies and Novel Biomarkers in Cancer. IdiPAZ, Madrid, Spain.
Itsaso Losantos-GarciaBiostatistics Unit, La Paz University Hospital. IdiPAZ, Madrid, Spain.
Sara Palacios-ZambranoMD Anderson Cancer Center, Madrid, Spain.
Gema Moreno-BuenoMD Anderson Cancer Center, Madrid, Spain.
Javier de CastroExperimental Therapies and Novel Biomarkers in Cancer. IdiPAZ, Madrid, Spain.
Virginia Martinez-MarinMedical Oncology Department, La Paz University Hospital, Madrid, Spain.
Inmaculada Ibanez-de-CaceresEpigenetics Laboratory. INGEMM, Paseo La Castellana 261. Edificio Bloque Quirúrgico Planta -2. University Hospital La Paz, 28046, Madrid, Spain. inma.ibanezca@salud.madrid.org.ORCID 0000-0001-9805-8486
Hospital Universitario La Paz · ESCentro de Investigación Biomédica en Red de Cáncer · ESMD Anderson Cancer Center Madrid · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe promoter hypermethylation of the methylguanine-DNA methyltransferase gene is a frequently used biomarker in daily clinical practice as it is associated with a favorable prognosis in glioblastoma patients treated with temozolamide. Due to the absence of adequately standardized techniques, international harmonization of the MGMT methylation biomarker is still an unmet clinical need for the diagnosis and treatment of glioblastoma patients.

resultsIn this study we carried out a clinical validation of a quantitative assay for MGMT methylation detection by comparing a novel quantitative MSP using double-probe (dp_qMSP) with the conventional MSP in 100 FFPE glioblastoma samples. We performed both technologies and established the best cutoff for the identification of positive-methylated samples using the quantitative data obtained from dp_qMSP. Kaplan-Meier curves and ROC time dependent curves were employed for the comparison of both methodologies.

conclusionsWe obtained similar results using both assays in the same cohort of patients, in terms of progression free survival and overall survival according to Kaplan-Meier curves. In addition, the results of ROC(t) curves showed that dp_qMSP increases the area under curve time-dependent in comparison with MSP for predicting progression free survival and overall survival over time. We concluded that dp_qMSP is an alternative methodology compatible with the results obtained with the conventional MSP. Our assay will improve the therapeutic management of glioblastoma patients, being a more sensitive and competitive alternative methodology that ensures the standardization of the MGMT-biomarker making it reliable and suitable for clinical use.

Indexed as

AdultAgedAged, 80 and overAntineoplastic Agents, AlkylatingBiomarkers, TumorBrain NeoplasmsCohort StudiesCpG IslandsDNA MethylationDNA Modification MethylasesDNA Repair EnzymesEpigenomicsFemaleGlioblastomaHumansKaplan-Meier EstimateAntineoplastic Agents, AlkylatingBiomarkers, TumorDNA Modification MethylasesDNA Repair EnzymesMGMT protein, humanTemozolomideTumor Suppressor ProteinsDp_qMSPGlioblastomaMGMT methylationMSP

Identifiers

PMID33750464
PMCPMC7941980
OpenAlexW3047623879

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.