Evidence map›Paper›PMID 33750331›Full record

ArticleBMC neurology2021

Single nucleotide polymorphisms in the ANGPTL4 gene and the SNP-SNP interactions on the risk of atherosclerotic Ischaemic stroke.

Chaoxiong Shen, Daofeng Fan, Huajun Fu, Chong Zheng, Yinjuan Chen, Zhizhou Hu

Open access · goldAbstract read
In one paragraph

Article in BMC neurology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
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  3. Review
  4. Review
  5. Article
  6. Impact ofFrontiers in neurology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Chaoxiong Shen *Neurology Department, Longyan First Hospital Affiliated to Fujian Medical University, No. 105, Jiuyi North Road, Longyan, 364000, Fujian, China.
Daofeng Fan *Neurology Department, Longyan First Hospital Affiliated to Fujian Medical University, No. 105, Jiuyi North Road, Longyan, 364000, Fujian, China. scx1032897589@sina.com.
Huajun FuNeurology Department, Longyan First Hospital Affiliated to Fujian Medical University, No. 105, Jiuyi North Road, Longyan, 364000, Fujian, China.
Chong ZhengNeurology Department, Longyan First Hospital Affiliated to Fujian Medical University, No. 105, Jiuyi North Road, Longyan, 364000, Fujian, China.
Yinjuan ChenNeurology Department, Longyan First Hospital Affiliated to Fujian Medical University, No. 105, Jiuyi North Road, Longyan, 364000, Fujian, China.
Zhizhou HuNeurology Department, Longyan First Hospital Affiliated to Fujian Medical University, No. 105, Jiuyi North Road, Longyan, 364000, Fujian, China.
First Affiliated Hospital of Fujian Medical University · CNFujian Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesThe purpose of this study was to investigate the impact of single nucleotide polymorphisms (SNPs) in the ANGPTL4 gene and the SNP-SNP interactions on atherosclerotic ischemic stroke (IS) risk. PATIENTS AND

methodsA case-control study was conducted. A total of 360 patients with atherosclerotic IS and 342 controls between December 2018 and December 2019 from Longyan First Hospital affiliated to Fujian Medical University were included. A logistic regression model was used to examine the association between SNPs and atherosclerotic IS risk. Odds ratios (ORs) and 95% confidence intervals (95% CIs) were calculated. Generalized multifactor dimensionality reduction was employed to analyze the SNP-SNP interaction.

resultsLogistic regression analysis showed that atherosclerotic IS risk was significantly lower in carriers with the rs11672433-T allele than those with the CC genotype (CT+ TT vs. CC); adjusted OR, 0.005; 95% CI, 0.02-0.11. We found a significant 2-locus model (P = 0.0010) involving rs11672433 and rs4076317; the cross-validation consistency of this model was 10 of 10, and the testing accuracy was 57.96%. Participants with the CT or TT of rs11672433 and CC of rs4076317 genotype have the lowest atherosclerotic IS risk, compared to subjects with CC of rs11672433 and the CC of rs4076317 genotype, OR (95%CI) was 0.06(0.02-0.22), after covariates adjustment for gender, age, smoking and alcohol status, hypertension, Diabetes mellitus, TG, TC, HDL-C, LDL-C, Uric acid.

conclusionsWe found that rs11672433 was associated with decreased atherosclerotic IS risk; we also found that gene-gene interaction between rs11672433 and rs4076317 was associated with decreased atherosclerotic IS risk.

Indexed as

AgedAngiopoietin-Like Protein 4AtherosclerosisCase-Control StudiesFemaleHumansIschemic StrokeMaleMiddle AgedPolymorphism, Single NucleotideAngiopoietin-Like Protein 4ANGPTL4 protein, humanANGPTLAtherosclerotic ischemic strokeGeneSingle nucleotide polymorphisms

Identifiers

PMID33750331
PMCPMC7941969
OpenAlexW3138942840

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.