ArticleBMC genomics2021
Genome-wide analysis of AP2/ERF superfamily in lotus (Nelumbo nucifera) and the association between NnADAP and rhizome morphology.
Article in BMC genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed, 22 citations in OpenAlex.
- Genome-wide AP2/ERF analysis identifies HmaERF87 as a positive regulator of Hydrangea macrophylla leaf spot resistance.Plant cell reports · 2026Article
- Proteomic Analysis of Lotus-DerivedPlants (Basel, Switzerland) · 2026Article
- Comprehensive characterization of the genes in AP2/ERF family and their involvement in salt-alkali stress response duringFrontiers in plant science · 2026Article
- Special Issue "Molecular Regulation of Drought and Salinity Tolerance in Plants".International journal of molecular sciences · 2025Article
- AnPlants (Basel, Switzerland) · 2025Article
- Genome-wide identification and analysis of ERF transcription factors related to abiotic stress responses in Nelumbo nucifera.BMC plant biology · 2024Article
- Genome-wide identification of AP2/ERF gene family in Coptis Chinensis Franch reveals its role in tissue-specific accumulation of benzylisoquinoline alkaloids.BMC genomics · 2024Article
- Monitoring Drought Tolerance in Oil Palm: Choline Monooxygenase as a Novel Molecular Marker.Plants (Basel, Switzerland) · 2023Article
- Genome-Wide Identification, Evolution, and Expression Analyses of AP2/ERF Family Transcription Factors inInternational journal of molecular sciences · 2023Article
- Identification of the NAC Transcription Factors and Their Function in ABA and Salinity Response inInternational journal of molecular sciences · 2022Article
- Studies on Lotus Genomics and the Contribution to Its Breeding.International journal of molecular sciences · 2022Review
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- Genome-wide identification and expression profiles of AP2/ERF transcription factor family in mung bean (Vigna radiata L.).Journal of applied genetics · 2022Article
- Genome-wide investigation ofFrontiers in plant science · 2022Article
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Corrections and comments
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Authors and funding
5 authors at 3 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe AP2/ERF family is widely present in plants and plays a crucial regulatory role in plant growth and development. As an essential aquatic horticultural model plant, lotus has an increasingly prominent economic and research value.
resultsWe have identified and analysed the AP2/ERF gene family in the lotus. Initially, 121 AP2/ERF family genes were identified. By analysing their gene distribution and protein structure, and their expression patterns during the development of lotus rhizome, combined with previous studies, we obtained an SNP (megascaffold_20:3578539) associated with lotus rhizome phenotype. This SNP was in the NnADAP gene of the AP2 subfamily, and the changes in SNP (C/T) caused amino acid conversion (proline/leucine). We constructed a population of 95 lotus varieties for SNP verification. Through population typing experiments, we found that the group with SNP CC had significantly larger lotus rhizome and higher soluble sugar content among the population.
conclusionsIn conclusion, we speculate that the alteration of the SNP in the NnADAP can affect the size and sugar content of the lotus rhizome.
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