Evidence map›Paper›PMID 33750290›Full record

ArticleBMC microbiology2021

Transcriptional expression of secondary resistance genes ccdB and repA2 is enhanced in presence of cephalosporin and carbapenem in Escherichia coli.

Somorita Baishya, Chandrayee Deshamukhya, Jayalaxmi Wangkheimayum, Bhaskar Jyoti Das, Anand Anbarasu, Anupam Das Talukdar, Amitabha Bhattacharjee, Manabendra Dutta Choudhury

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Somorita BaishyaDepartment of Life Science and Bioinformatics, Assam University, Silchar, India.
Chandrayee DeshamukhyaDepartment of Microbiology, Assam University, Silchar, India.
Jayalaxmi WangkheimayumDepartment of Microbiology, Assam University, Silchar, India.
Bhaskar Jyoti DasDepartment of Microbiology, Assam University, Silchar, India.
Anand AnbarasuMedical & Biological Computing Laboratory, School of Biosciences & Technology, VIT University, Vellore, India.
Anupam Das TalukdarDepartment of Life Science and Bioinformatics, Assam University, Silchar, India.
Amitabha BhattacharjeeDepartment of Microbiology, Assam University, Silchar, India.
Manabendra Dutta ChoudhuryDepartment of Life Science and Bioinformatics, Assam University, Silchar, India. drmdc@bioinfoaus.ac.in.
Assam University · INVellore Institute of Technology University · IN

Funding

Indian Council of Medical Research AMR/Fellowship/19/2019-ECD-11 dtd. 08.07.2019
6 · The paper itself

Abstract

backgroundThe issue of carbapenem resistance in E.coli is very concerning and it is speculated that cumulative effect of both primary resistance genes and secondary resistance genes that act as helper to the primary resistance genes are the reason behind their aggravation. Therefore, here we attempted to find the role of two secondary resistance genes (SRG) ccdB and repA2 in carbapenem resistance in E. coli (CRE). In this context influential genes belonging to secondary resistome that act as helper to the primary resistance genes like bla

resultsOut of the 21 genes reported in the in silico study, 2 genes viz. repA2 and ccdB were selected for transcriptional expression analysis. repA2, coding replication regulatory protein, was downregulated in response to carbapenems and cephalosporins. ccdB, coding for plasmid maintenance protein, was also downregulated in response to carbapenems except imipenem and cephalosporins. Following plasmid elimination assay increase in diameter of zone of inhibition under stress of both antibiotics was observed as compared to uncured control hinting at the reversion of antibiotic susceptibility by the-then resistant bacteria.

conclusionSRGs repA2 and ccdB help sustenance of bla

Indexed as

Anti-Bacterial AgentsBacterial ProteinsCarbapenemsCephalosporinsEscherichia coliEscherichia coli ProteinsGene Expression Regulation, BacterialMicrobial Sensitivity TestsAnti-Bacterial AgentsBacterial ProteinsCarbapenemsCcdB protein, Plasmid FCephalosporinsEscherichia coli ProteinsCarabapenemccdBCephalosporinEscherichia colirepA2Secondary resistance

Identifiers

PMID33750290
PMCPMC7941987
OpenAlexW3133039921

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.