Evidence map›Paper›PMID 33744969›Full record

ArticleNucleic acids research2021

TISIGNER.com: web services for improving recombinant protein production.

Bikash K Bhandari, Chun Shen Lim, Paul P Gardner

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. A review on computational models for predicting protein solubility.Journal of microbiology (Seoul, Korea) · 2025
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. A universal approach to gene expression engineering.Synthetic biology (Oxford, England) · 2022
    Article
  14. Article
  15. Strategies to Enhance Periplasmic Recombinant Protein Production Yields inFrontiers in bioengineering and biotechnology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Bikash K BhandariDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin 9054, New Zealand.ORCID 0000-0001-8698-5258
Chun Shen LimDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin 9054, New Zealand.ORCID 0000-0001-7015-0125
Paul P GardnerDepartment of Biochemistry, School of Biomedical Sciences, University of Otago, Dunedin 9054, New Zealand.ORCID 0000-0002-7808-1213
University of Otago · NZUniversity of Canterbury · NZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Experiments that are planned using accurate prediction algorithms will mitigate failures in recombinant protein production. We have developed TISIGNER (https://tisigner.com) with the aim of addressing technical challenges to recombinant protein production. We offer three web services, TIsigner (Translation Initiation coding region designer), SoDoPE (Soluble Domain for Protein Expression) and Razor, which are specialised in synonymous optimisation of recombinant protein expression, solubility and signal peptide analysis, respectively. Importantly, TIsigner, SoDoPE and Razor are linked, which allows users to switch between the tools when optimising genes of interest.

Indexed as

SoftwareInternetPeptide Chain Initiation, TranslationalProtein Sorting SignalsRecombinant ProteinsSolubilityProtein Sorting SignalsRecombinant Proteins

Identifiers

PMID33744969
PMCPMC8265118
OpenAlexW3139386510

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.