Evidence map›Paper›PMID 33743191›Full record

ArticleCell stem cell2021

Chronic infection drives Dnmt3a-loss-of-function clonal hematopoiesis via IFNγ signaling.

Daniel Hormaechea-Agulla, Katie A Matatall, Duy T Le, Bailee Kain, Xiaochen Long, Pawel Kus, Roman Jaksik, Grant A Challen, Marek Kimmel, Katherine Y King

Open access · bronzeAbstract read
In one paragraph

Article in Cell stem cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 248 papers.

0numbers the graph read from it
0cells of the map it votes in
248citing papers in PubMed
18.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

248 citing papers in PubMed, 305 citations in OpenAlex.

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188 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Daniel Hormaechea-AgullaDepartment of Pediatrics, Section of Infectious Diseases, Baylor College of Medicine, Houston, TX 77030, USA.
Katie A MatatallDepartment of Pediatrics, Section of Infectious Diseases, Baylor College of Medicine, Houston, TX 77030, USA.
Duy T LeProgram in Immunology, Baylor College of Medicine, Houston, TX 77030, USA.
Bailee KainProgram in Translational Biology and Molecular Medicine, Baylor College of Medicine, Houston, TX 77030, USA.
Xiaochen LongDepartment of Statistics, Rice University, Houston, TX 77030, USA.
Pawel KusDepartment of Systems Biology and Engineering and Biotechnology Centre, Silesian University of Technology, 44-100 Gliwice, Poland.
Roman JaksikDepartment of Systems Biology and Engineering and Biotechnology Centre, Silesian University of Technology, 44-100 Gliwice, Poland.
Grant A ChallenDepartment of Medicine, Washington University School of Medicine, St. Louis, MO 63110, USA.
Marek KimmelDepartment of Statistics, Rice University, Houston, TX 77030, USA; Department of Systems Biology and Engineering and Biotechnology Centre, Silesian University of Technology, 44-100 Gliwice, Poland.
Katherine Y KingDepartment of Pediatrics, Section of Infectious Diseases, Baylor College of Medicine, Houston, TX 77030, USA; Program in Immunology, Baylor College of Medicine, Houston, TX 77030, USA; Program in Translational Biology and Molecular Medicine, Baylor College of Medicine, Houston, TX 77030, USA; Stem Cells and Regenerative Medicine Center, Baylor College of Medicine, Houston, TX 77030, USA. Electronic address: kyk@bcm.edu.
Baylor College of Medicine · USRice University · USSilesian University of Technology · PLWashington University in St. Louis · US

Funding

Tumor BiologyP30CA125123 · NCI · BAYLOR COLLEGE OF MEDICINE · PI DAVID R ROWLEY · 2007 to 2026
$73.9M
Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
Virology CoreP30AI036211 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI RICE, ANDREW P · 1994 to 2015
$21.7M
Hematology Training ProgramT32DK060445 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI GOODELL, MARGARET A. · 2002 to 2023
$8.3M
Training In Cell and Gene TherapyT32HL092332 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI MALCOLM K. BRENNER, Bruno Di Stefano · 2008 to 2026
$6.9M
Impact of Infection and Inflammation on Primitive HematopoiesisR35HL155672 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI Katherine Yudeh King · 2021 to 2026
$5.1M
Immunology Scientist Training ProgramT32AI053831 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI CORRY, DAVID B · 2003 to 2018
$4.2M
The Contribution ofInfection to Preleukemic Clonal HematopoiesisR01HL136333 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI KING, KATHERINE YUDEH · 2017 to 2020
$1.9M
Inflammatory Regulation of Hematopoietic Stem and Progenitor Cells to Enhance Innate ImmunityR01HL134880 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI KING, KATHERINE YUDEH · 2017 to 2020
$1.6M
Integrated Instrument System for Single Cell GenomicsS10OD020066 · OD · BAYLOR COLLEGE OF MEDICINE · PI METELITSA, LEONID S · 2015 to 2015
$473k
BD Biosciences Special Order LSRIIS10RR024574 · NCRR · BAYLOR COLLEGE OF MEDICINE · PI LUMPKIN, ELLEN A · 2009 to 2009
$430k
The mechanism of Batf2-mediated HSC differentiation during chronic infectionF31HL154661 · NHLBI · BAYLOR COLLEGE OF MEDICINE · PI LE, DUY TRI · 2020 to 2022
$103k
NCI NIH HHS P30 CA125123NCRR NIH HHS S10 RR024574NHLBI NIH HHS F31 HL154661NHLBI NIH HHS R01 HL134880NHLBI NIH HHS R01 HL136333NHLBI NIH HHS R35 HL155672NHLBI NIH HHS T32 HL092332NIAID NIH HHS P30 AI036211NIAID NIH HHS T32 AI053831NIDDK NIH HHS P30 DK056338NIDDK NIH HHS T32 DK060445NIH HHS S10 OD020066
6 · The paper itself

Abstract

Age-related clonal hematopoiesis (CH) is a risk factor for malignancy, cardiovascular disease, and all-cause mortality. Somatic mutations in DNMT3A are drivers of CH, but decades may elapse between the acquisition of a mutation and CH, suggesting that environmental factors contribute to clonal expansion. We tested whether infection provides selective pressure favoring the expansion of Dnmt3a mutant hematopoietic stem cells (HSCs) in mouse chimeras. We created Dnmt3a-mosaic mice by transplanting Dnmt3a

Indexed as

DNA (Cytosine-5-)-MethyltransferasesHematopoiesisAnimalsClonal HematopoiesisHematopoietic Stem CellsMiceMutationDNA (Cytosine-5-)-Methyltransferasesbone marrowCHclonal competitionclonal hematopoiesisDNMT3Aepigenetic regulationhematopoietic stem cellinfectioninterferon gammamycobacterial infection

Identifiers

PMID33743191
PMCPMC8349829
OpenAlexW3138449921

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.