Evidence map›Paper›PMID 33742098›Full record

ArticleCommunications biology2021

Population genomics and haplotype analysis in spelt and bread wheat identifies a gene regulating glume color.

Michael Abrouk, Naveenkumar Athiyannan, Thomas Müller, Yveline Pailles, Christoph Stritt, Anne C Roulin, Chenggen Chu, Shuyu Liu, Takumi Morita, Hirokazu Handa and 3 more

Abstract read
In one paragraph

Article in Communications biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Ancient diversity ofFrontiers in plant science · 2025
    Article
  3. Genome-Wide Identification and Expression Analysis ofInternational journal of molecular sciences · 2024
    Article
  4. Article
  5. Updated guidelines for gene nomenclature in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  6. Article
  7. A CombinatorialGenes · 2022
    Article
  8. Article
  9. Article
  10. Multiple Wheat Genomes Reveal NovelFrontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Michael Abrouk *Center for Desert Agriculture, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID 0000-0001-9082-1432
Naveenkumar Athiyannan *Center for Desert Agriculture, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID 0000-0002-9232-4680
Thomas Müller *Department of Plant and Microbial Biology, University of Zurich, Zollikerstrasse 107, Zurich, Switzerland.
Yveline PaillesCenter for Desert Agriculture, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.
Christoph StrittDepartment of Plant and Microbial Biology, University of Zurich, Zollikerstrasse 107, Zurich, Switzerland.
Anne C RoulinDepartment of Plant and Microbial Biology, University of Zurich, Zollikerstrasse 107, Zurich, Switzerland.
Chenggen ChuTexas A&M AgriLife Research, Amarillo, TX, USA.
Shuyu LiuTexas A&M AgriLife Research, Amarillo, TX, USA.
Takumi MoritaDepartment of Agricultural and Life Sciences, Kyoto Prefectural University, Kyoto, Japan.
Hirokazu HandaLaboratory of Plant Breeding, Graduate School of Life and Environmental Sciences, Kyoto Prefectural University, Kyoto, Japan.
Jesse PolandDepartment of Plant Pathology, Kansas State University, Manhattan, KS, USA.ORCID 0000-0002-7856-1399
Beat KellerDepartment of Plant and Microbial Biology, University of Zurich, Zollikerstrasse 107, Zurich, Switzerland.ORCID 0000-0003-2379-9225
Simon G KrattingerCenter for Desert Agriculture, Biological and Environmental Science and Engineering Division (BESE), King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia. simon.krattinger@kaust.edu.sa.ORCID 0000-0001-6912-7411

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The cloning of agriculturally important genes is often complicated by haplotype variation across crop cultivars. Access to pan-genome information greatly facilitates the assessment of structural variations and rapid candidate gene identification. Here, we identified the red glume 1 (Rg-B1) gene using association genetics and haplotype analyses in ten reference grade wheat genomes. Glume color is an important trait to characterize wheat cultivars. Red glumes are frequent among Central European spelt, a dominant wheat subspecies in Europe before the 20

Indexed as

ColorGenetic VariationGenome, PlantHaplotypesMetagenomicsChromosomes, PlantDNA Copy Number VariationsGene DosageGene Expression Regulation, PlantGenome-Wide Association StudyHigh-Throughput Nucleotide SequencingPhenotypePlant ProteinsPolymorphism, Single NucleotideTranscription FactorsTriticumPlant ProteinsTranscription Factors

Identifiers

PMID33742098
PMCPMC7979816

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.